breseq  version 0.33.1  revision 8505477f25b3 mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Marginal read alignment evidence
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	REL606	1,484,105	0	A	G	43.2%	44.9 / 33.5	44	G55G (GGA→GGG)	ydcU	predicted spermidine/putrescine transporter subunit
*	REL606	3,492,082	0	T	G	41.5%	69.8 / 31.3	53	V490G (GTG→GGG)	glpD	sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding
*	REL606	2,296,329	0	A	C	41.2%	68.7 / 29.5	51	intergenic (‑149/‑66)	inaA/yfaH	hypothetical protein/hypothetical protein
*	REL606	2,631,772	0	A	C	37.8%	77.9 / 13.5	45	intergenic (‑267/‑141)	rpoE/nadB	RNA polymerase, sigma 24 (sigma E) factor/L‑aspartate oxidase
*	REL606	4,393,061	0	T	G	35.5%	47.2 / 15.1	31	V211G (GTG→GGG)	aidB	isovaleryl CoA dehydrogenase
*	REL606	1,383,157	0	T	G	32.4%	56.7 / 11.0	37	G224G (GGT→GGG)	ycjX	conserved protein with nucleoside triphosphate hydrolase domain
*	REL606	3,921,703	0	T	G	30.9%	103.0 / 12.3	55	intergenic (‑88/+111)	ppiC/ECB_03654	peptidyl‑prolyl cis‑trans isomerase C (rotamase C)/hypothetical protein
*	REL606	4,322,565	0	T	G	29.4%	100.6 / 17.8	51	G157G (GGT→GGG)	melB	melibiose:sodium symporter
*	REL606	1,747,903	0	G	T	29.2%	164.8 / 58.2	72	A8S (GCA→TCA)	ydiL	hypothetical protein
*	REL606	4,574,252	0	T	G	28.6%	87.7 / 12.1	43	S5S (TCA→TCC)	hpaX	hypothetical 4‑hydroxyphenylacetate permease
*	REL606	3,733,719	0	C	G	25.6%	93.4 / 10.9	39	G63G (GGC→GGG)	gumD	ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding
*	REL606	1,176,010	0	T	G	25.0%	134.5 / 10.1	57	A37A (GCA→GCC)	fhuE	ferric‑rhodotorulic acid outer membrane transporter