mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 3,492,082 | 0 | T | G | 47.9% | 73.7 / 46.7 | 71 | V490G (GTG→GGG) | glpD | sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding |
| * | REL606 | 2,231,892 | 0 | A | C | 36.4% | 99.7 / 17.2 | 55 | T25P (ACC→CCC) | yejH | predicted ATP‑dependet helicase |
| * | REL606 | 3,983,700 | 0 | T | G | 36.2% | 61.9 / 29.3 | 47 | T397P (ACC→CCC) | ECB_03713 | conserved hypothetical protein |
| * | REL606 | 1,383,157 | 0 | T | G | 34.1% | 78.1 / 13.1 | 44 | G224G (GGT→GGG) | ycjX | conserved protein with nucleoside triphosphate hydrolase domain |
| * | REL606 | 4,011,104 | 0 | T | G | 32.6% | 78.9 / 11.8 | 43 | G80G (GGT→GGG) | yigZ | predicted elongation factor |
| * | REL606 | 4,396,513 | 0 | C | G | 28.6% | 91.3 / 22.5 | 42 | S32S (TCG→TCC) | yjfQ | DNA‑binding transcriptional dual regulator |
| * | REL606 | 1,747,903 | 0 | G | T | 27.8% | 228.0 / 68.4 | 90 | A8S (GCA→TCA) | ydiL | hypothetical protein |
| * | REL606 | 1,484,105 | 0 | A | G | 27.3% | 120.6 / 18.3 | 55 | G55G (GGA→GGG) | ydcU | predicted spermidine/putrescine transporter subunit |
| * | REL606 | 2,631,772 | 0 | A | C | 27.0% | 149.2 / 10.7 | 63 | intergenic (‑267/‑141) | rpoE/nadB | RNA polymerase, sigma 24 (sigma E) factor/L‑aspartate oxidase |
| * | REL606 | 4,000,295 | 0 | T | G | 24.5% | 103.3 / 10.2 | 49 | G533G (GGT→GGG) | ubiB | putative ubiquinone biosynthesis protein UbiB |
| * | REL606 | 2,296,329 | 0 | A | C | 23.8% | 216.6 / 22.0 | 84 | intergenic (‑149/‑66) | inaA/yfaH | hypothetical protein/hypothetical protein |
| * | REL606 | 154,497 | 0 | T | G | 23.3% | 221.7 / 16.5 | 86 | A191A (GCA→GCC) | yadL | predicted fimbrial‑like adhesin protein |
| * | REL606 | 4,141,009 | 0 | G | A | 22.2% | 178.3 / 19.4 | 72 | E28K (GAA→AAA) | yijC | DNA‑binding transcriptional repressor |
| * | REL606 | 4,043,426 | 0 | T | A | 21.0% | 161.7 / 11.2 | 63 | I200F (ATT→TTT) | yihO | predited transporter |
| * | REL606 | 3,733,719 | 0 | C | G | 20.3% | 164.3 / 18.8 | 59 | G63G (GGC→GGG) | gumD | ADP‑L‑glycero‑D‑mannoheptose‑6‑epimerase, NAD(P)‑binding |