| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 4,201,922 | IS150 (+) +3 bp | coding (636‑638/825 nt) | iclR ← | DNA‑binding transcriptional repressor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3893554 = | NA (NA) | 33 (0.990) | 26/148 | 0.3 | 96.9% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 4201924 | 1 (0.030) | coding (636/825 nt) | iclR | DNA‑binding transcriptional repressor | |||||
| * | ? | REL606 | = 3894996 | NA (NA) | 38 (1.150) | 30/146 | 0.2 | 97.3% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 4201922 = | 1 (0.030) | coding (638/825 nt) | iclR | DNA‑binding transcriptional repressor | |||||
TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3893629‑3893554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTGTATTTTCGATGAGCACCGTGAACCGTTT < REL606/4201924‑4201855 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:353942/1‑76TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 1:842862/1‑76TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA < 1:1034046/76‑1TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA > 2:433143/1‑76 TTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACG < 1:244994/76‑1 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGA < 1:539455/76‑1 TCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGA < 1:1045949/76‑1 CAAAAGGGTGTTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGAT > 2:839748/1‑76 AAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATG < 2:818773/76‑1 AAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATG < 2:688388/76‑1 AAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAG > 2:834089/1‑76 GGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGA < 2:28173/76‑1 GTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGAAC < 1:810274/76‑1 TTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGAACATG > 2:784789/1‑76 TTTTGGCTTTAACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGAACATG > 1:137485/1‑76 GGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGAACATGCGCT < 2:435145/76‑1 GACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCCGTACATGATGAGGAAAATGTGCAGGTGCT > 1:105746/1‑76 TATTAGGGGCTATTCCATTTCATNGCCCAACNANATGGGTCCAGATCACGATGAGGAACACGCGCTGGGGCTACGT > 1:998833/1‑76 TTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGCCCATGCGCTGGGGCTACGTTG > 2:903417/1‑76 GCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGC < 2:820804/76‑1 TATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAG < 1:338180/76‑1 TCCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGT > 1:374584/1‑76 CCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTG > 2:421117/1‑76 CCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTG > 1:529209/1‑76 CCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTG > 2:578476/1‑76 CCATTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTG < 2:114476/76‑1 TTTCATCGTCCAACAAAATGGGTGCAGTACACGATGAGAAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTGTAT > 1:721684/1‑76 CATCGGCCAACAAAATGAGTGCACTACACGATGAGGAACACGCGCTGGGGCTGCGTTGCCTTGCAGCGTGTATTTT < 2:820635/76‑1 CGTCCAACAAAATGGGTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTGTATTTTCGA > 1:307221/1‑76 CAAAATGGGTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTGTATTTTCTATGAGCAC > 1:576759/1‑76 CAAAATGGGTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTGTATTTTCGATGAGCAC > 2:815281/1‑76 GGTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTGTATTTTCGATGAGCACCGTGAAC < 2:1061364/76‑1 GGTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTAGCAGCGTGTATTTTCGATGAGCACCGTGAAC > 2:699887/1‑76 GTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTGTATTTTCGATGAGCACCGTGAACC < 1:631839/76‑1 GTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTGTATTTTCGATGAGCACCGTGAACC < 1:274561/76‑1 GTGCAGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTGTATTTTCGATGAGCACCGTGAACC > 1:160796/1‑76 AGTACACGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTGTATTTTCGATGAGCACCGTGAACCGTTT < 2:588277/76‑1 TTTTCAAAAGGGTATTTTGGCTTTGACATATTAGGGGCTATTCCATTTCATCGTCCAACAAAATGGGTGCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3893629‑3893554‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCGATGAGGAACATGCGCTGGGGCTACGTTGCCTTGCAGCGTGTATTTTCGATGAGCACCGTGAACCGTTT < REL606/4201924‑4201855 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |