Predicted mutation | ||||||
---|---|---|---|---|---|---|
evidence | seq id | position | mutation | annotation | gene | description |
JC JC | REL606 | 4,201,922 | IS150 (+) +3 bp | coding (636‑638/825 nt) | iclR ← | DNA‑binding transcriptional repressor |
New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 3893554 = | NA (NA) | 33 (0.990) | 26/148 | 0.3 | 96.9% | noncoding (1/1443 nt) | IS150 | repeat region |
? | REL606 | = 4201924 | 1 (0.030) | coding (636/825 nt) | iclR | DNA‑binding transcriptional repressor | |||||
* | ? | REL606 | = 3894996 | NA (NA) | 38 (1.150) | 30/146 | 0.2 | 97.3% | noncoding (1443/1443 nt) | IS150 | repeat region |
? | REL606 | 4201922 = | 1 (0.030) | coding (638/825 nt) | iclR | DNA‑binding transcriptional repressor |
TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAC > REL606/3894924‑3894999 | tGACTCCNATTGAATATCGGAGTCNGACCTATATGCCTCGTNTTTAACTGACCAACTTTTTGGGGTCAGTACAGAc < 2:955144/76‑1 (MQ=11) tGACTCCGATTGAATATCGGACTCAGACCGATATGCCTCGCGTTTAACTGTCCAATTTTTTGGGGTCAGTACAgta < 1:117843/76‑3 (MQ=11) tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 1:597936/76‑1 (MQ=34) tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 1:597938/76‑1 (MQ=34) tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 1:797012/76‑1 (MQ=34) tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 2:695042/76‑1 (MQ=34) tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 2:716926/76‑1 (MQ=34) tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 2:814025/76‑1 (MQ=34) tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGGCAGTACAGAc < 2:593652/76‑1 (MQ=21) tGACTACAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 2:883951/76‑1 (MQ=21) | TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAC > REL606/3894924‑3894999 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |