| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 4,201,922 | IS150 (+) +3 bp | coding (636‑638/825 nt) | iclR ← | DNA‑binding transcriptional repressor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3893554 = | NA (NA) | 33 (0.990) | 26/148 | 0.3 | 96.9% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 4201924 | 1 (0.030) | coding (636/825 nt) | iclR | DNA‑binding transcriptional repressor | |||||
| * | ? | REL606 | = 3894996 | NA (NA) | 38 (1.150) | 30/146 | 0.2 | 97.3% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 4201922 = | 1 (0.030) | coding (638/825 nt) | iclR | DNA‑binding transcriptional repressor | |||||
TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAC > REL606/3894924‑3894999 | tGACTCCNATTGAATATCGGAGTCNGACCTATATGCCTCGTNTTTAACTGACCAACTTTTTGGGGTCAGTACAGAc < 2:955144/76‑1 (MQ=11)tGACTCCGATTGAATATCGGACTCAGACCGATATGCCTCGCGTTTAACTGTCCAATTTTTTGGGGTCAGTACAgta < 1:117843/76‑3 (MQ=11)tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 1:597936/76‑1 (MQ=34)tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 1:597938/76‑1 (MQ=34)tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 1:797012/76‑1 (MQ=34)tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 2:695042/76‑1 (MQ=34)tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 2:716926/76‑1 (MQ=34)tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 2:814025/76‑1 (MQ=34)tGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGGCAGTACAGAc < 2:593652/76‑1 (MQ=21)tGACTACAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAc < 2:883951/76‑1 (MQ=21) | TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAGAC > REL606/3894924‑3894999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |