| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 4,201,922 | IS150 (+) +3 bp | coding (636‑638/825 nt) | iclR ← | DNA‑binding transcriptional repressor |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3893554 = | NA (NA) | 33 (0.990) | 26/148 | 0.3 | 96.9% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | = 4201924 | 1 (0.030) | coding (636/825 nt) | iclR | DNA‑binding transcriptional repressor | |||||
| * | ? | REL606 | = 3894996 | NA (NA) | 38 (1.150) | 30/146 | 0.2 | 97.3% | noncoding (1443/1443 nt) | IS150 | repeat region |
| ? | REL606 | 4201922 = | 1 (0.030) | coding (638/825 nt) | iclR | DNA‑binding transcriptional repressor | |||||
GCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGA > REL606/3893480‑3893626 | gCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTg > 2:775933/1‑76 (MQ=255) cACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAAGTGGGTNCTCAGGNCGAAATCTAACGCCAGCCTgn > 1:901820/1‑75 (MQ=255) aCCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTa > 1:395372/1‑76 (MQ=255) aGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTg < 1:602770/76‑1 (MQ=255) gATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGc < 1:589425/76‑1 (MQ=255) cAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTATTCAGGTCGAAATCTAACGCCAGACTGTACTGCAcc > 1:242156/1‑76 (MQ=255) ttGAAATCCCGCCAAACAGGGTTATCGAGCTGGGTACTCAGGTCGAAATCTATCGCCAGACTGTACTGCGCCCAtt < 2:290778/76‑1 (MQ=255) ttGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCAtt > 2:233338/1‑76 (MQ=255) gAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCAtttt > 1:384874/1‑76 (MQ=255) gAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCAtttt > 1:384876/1‑76 (MQ=255) aaaTCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTttg > 2:570698/1‑76 (MQ=255) aaaTCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTttg > 2:570706/1‑76 (MQ=255) ccGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGa > 2:75449/1‑76 (MQ=255) gCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACg < 2:808981/76‑1 (MQ=255) ccAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGa < 2:829417/76‑1 (MQ=255) cAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGAt > 2:261276/1‑76 (MQ=255) cAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGAt < 2:282089/76‑1 (MQ=255) aaaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATg < 2:154585/76‑1 (MQ=255) aaCAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGa < 2:348448/76‑1 (MQ=255) cAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGaaa < 2:517526/76‑1 (MQ=255) gggTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATg < 1:256478/76‑1 (MQ=255) ttATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGaa > 1:306763/1‑76 (MQ=255) ttATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGaa < 2:235996/76‑1 (MQ=255) tATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt > 2:380158/1‑76 (MQ=255) tATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAt > 2:384986/1‑76 (MQ=255) aTCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCANCCATTTNGTTGGACGATGAAATGTAAtn > 1:910074/1‑75 (MQ=255) cGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTATGTTGGACGATGAAATGGAATAGc > 1:778032/1‑76 (MQ=255) aaCTGGGTACTCAGGTCGAAATCTAACTCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGccc < 1:444177/76‑1 (MQ=255) aCTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGcccc > 1:380048/1‑76 (MQ=255) tGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTa > 1:266268/1‑76 (MQ=255) aaaTCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCaa < 1:174900/76‑1 (MQ=255) cTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATa < 1:364439/76‑1 (MQ=255) cTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAAGNGAAGAGCCCCTAATATGTCAAAGCCAAAATa < 1:86906/76‑1 (MQ=255) cGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCt > 1:314733/1‑76 (MQ=40) cGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCt < 2:314200/76‑1 (MQ=40) cGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCt > 2:324267/1‑76 (MQ=40) gCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCtt < 2:838342/76‑1 (MQ=39) gCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCtt < 1:887961/76‑1 (MQ=39) ccAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCttt > 2:510332/1‑76 (MQ=38) aGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTg < 1:276332/76‑1 (MQ=34) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGACTAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 1:787192/1‑76 (MQ=17) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAGTATGTCAAAGCCAAAATACCCTTTTGa > 1:638396/1‑76 (MQ=17) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTgn > 1:944017/1‑75 (MQ=17) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 2:385324/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 2:391647/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 2:260661/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 1:606374/1‑76 (MQ=32) gACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGa > 1:559453/1‑76 (MQ=32) | GCACCAGATCAATTTGAAATCCCGCCAAACAGGGTTATCGAACTGGGTACTCAGGTCGAAATCTAACGCCAGACTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGA > REL606/3893480‑3893626 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |