| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 4,607,664 | IS1 (–) +9 bp | coding (202‑210/1323 nt) | deoA → | thymidine phosphorylase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4550679 = | NA (NA) | 49 (0.830) | 29/150 | 1.0 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 4607664 = | 0 (0.000) | coding (202/1323 nt) | deoA | thymidine phosphorylase | |||||
| * | ? | REL606 | = 4551446 | NA (NA) | 82 (1.420) | 50/148 | 0.1 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | REL606 | = 4607672 | 0 (0.000) | coding (210/1323 nt) | deoA | thymidine phosphorylase | |||||
ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4551371‑4551446‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTGGAAGAAAAT < REL606/4607672‑4607598 ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:428897/76‑1ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:1545685/76‑1ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:1678271/76‑1ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:1791964/76‑1ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:888912/76‑1ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC > 1:752529/1‑76ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:316601/76‑1ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC > 1:1247345/1‑76ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC > 2:493682/1‑76ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:1157172/76‑1ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC > 2:1626865/1‑76ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC > 2:1761346/1‑76 TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG < 1:980910/76‑1 TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:1509968/1‑76 TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG < 1:34388/76‑1 TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 2:1097067/1‑76 CGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGA < 2:876262/76‑1 GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAG < 2:86107/76‑1 GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAG < 1:539931/76‑1 GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAG < 1:1363469/76‑1 GTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGA < 1:425555/76‑1 GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAC > 2:1763979/1‑76 GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAAC > 1:554723/1‑76 CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTT > 1:917217/1‑76 TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTC > 2:826567/1‑76 GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCC < 2:886042/76‑1 GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCC < 1:1309340/76‑1 GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCC > 2:1573641/1‑76 CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCT > 2:514569/1‑76 ATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTG > 1:1773953/1‑76 TGACAAAGTCATCGGGCATTATTTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGA > 2:1102651/1‑76 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCT > 2:908469/1‑76 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCT > 2:661988/1‑76 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCT > 2:189014/1‑76 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGATGGAGTCATTACCGAGAACGGTTCCTGAATCT > 2:929364/1‑76 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGC > 1:955739/1‑76 CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCAT > 1:471960/1‑76 CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCAT > 2:625552/1‑76 TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCG < 2:376416/76‑1 TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCG > 1:989361/1‑76 CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGC > 1:841580/1‑76 CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGC > 1:973037/1‑76 GGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCA < 2:1138843/76‑1 CATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATG > 2:1194928/1‑76 CATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATG > 2:862822/1‑76 nTTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGG > 1:186114/2‑76 TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGT > 2:1743670/1‑76 TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTC < 2:588299/76‑1 TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTC < 1:1251990/76‑1 TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTC > 1:756811/1‑76 ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCA > 2:234635/1‑76 ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCA > 1:1231354/1‑76 TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCG > 2:1740282/1‑76 AACATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAG > 1:1634367/1‑76 ATAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACA < 2:291467/76‑1 TAAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACAC > 2:1584665/1‑76 AAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACG < 2:1025393/76‑1 AAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACG > 1:189186/1‑76 AAAACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACG > 2:1594851/1‑76 AACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCT > 2:626055/1‑76 AACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCT < 1:1845855/76‑1 AACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCT > 2:22089/1‑76 ACACTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTC < 1:812642/76‑1 CTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGG > 1:1061036/1‑76 CTATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGG > 2:1798332/1‑76 ATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCA > 1:73773/1‑76 ATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCA > 1:427027/1‑76 ATCAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCA > 1:126001/1‑76 CAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATT > 1:1540644/1‑76 CAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATT > 1:1122268/1‑76 CAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATT < 1:473416/76‑1 CAATAAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATT > 1:55005/1‑76 AAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCA > 1:1085907/1‑76 AAGTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCA < 2:1117766/76‑1 GTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATA < 2:938478/76‑1 GTTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATA > 2:1514007/1‑76 TTGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATAT > 2:1599620/1‑76 TGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATC > 2:1010744/1‑76 TGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATC > 1:103091/1‑76 TGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATC > 2:910286/1‑76 TGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATC > 2:66501/1‑76 TGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATC > 2:66524/1‑76 TGGAGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATC > 1:1716098/1‑76 AGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTG < 2:554723/76‑1 AGTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTG > 1:1417297/1‑76 GTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTGG < 1:1011867/76‑1 GTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTGG > 1:1389458/1‑76 GTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTGG < 1:1787263/76‑1 GTCATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTGG > 2:772588/1‑76 CATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTGGAA < 1:970515/76‑1 ATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTGGAAG < 1:627699/76‑1 ATTACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTGGAAG > 2:645130/1‑76 TACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTGGAAGAA < 1:197124/76‑1 TACCGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTGGAAGAA > 1:85241/1‑76 CGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTGGAAGAAAAT > 1:1293712/1‑76 ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/4551371‑4551446‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cGAGAACGGTTCCTGAATCTCGCATCGCCATGGTCAGCGAGACACGCTCAGGCATTGTCATATCGTGGAAGAAAAT < REL606/4607672‑4607598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |