| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 4,607,664 | IS1 (–) +9 bp | coding (202‑210/1323 nt) | deoA → | thymidine phosphorylase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4550679 = | NA (NA) | 49 (0.830) | 29/150 | 1.0 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | 4607664 = | 0 (0.000) | coding (202/1323 nt) | deoA | thymidine phosphorylase | |||||
| * | ? | REL606 | = 4551446 | NA (NA) | 82 (1.420) | 50/148 | 0.1 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | REL606 | = 4607672 | 0 (0.000) | coding (210/1323 nt) | deoA | thymidine phosphorylase | |||||
CGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAGGCGCAATATGA > REL606/4551373‑4551520 | cGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAc < 2:1454584/76‑1 (MQ=31) ggAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCt < 2:888540/76‑1 (MQ=35) gAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCtt < 2:216293/76‑1 (MQ=38) aGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCttt < 2:1807646/76‑1 (MQ=39) aGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCttt < 1:863812/76‑1 (MQ=39) gCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCtttt < 1:1148973/76‑1 (MQ=40) gCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCtttt < 2:932710/76‑1 (MQ=40) gCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCtttt < 2:1195214/76‑1 (MQ=40) gCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCtttt < 1:96060/76‑1 (MQ=40) cTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTa < 2:1827217/76‑1 (MQ=255) tGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTaa < 2:1851718/76‑1 (MQ=255) gCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTaaa > 2:32718/1‑76 (MQ=255) tGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGc < 1:859216/76‑1 (MQ=255) gACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCt > 2:1380513/1‑76 (MQ=255) aCAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCtt < 1:1353407/76‑1 (MQ=255) aCAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCtt > 2:1413815/1‑76 (MQ=255) cAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTa > 2:1218528/1‑76 (MQ=255) cAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTa > 2:1078534/1‑76 (MQ=255) aaaGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTaa < 1:1724979/76‑1 (MQ=255) aaGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAAc < 1:68651/76‑1 (MQ=255) aaGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAAc < 1:923561/76‑1 (MQ=255) tCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAAcccc > 1:1817062/1‑76 (MQ=255) cATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCt < 2:6857/76‑1 (MQ=255) cATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCCTAACCCCt < 2:1652843/76‑1 (MQ=255) aTCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCttt > 1:658866/1‑59 (MQ=255) aTCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCttt < 2:658866/59‑1 (MQ=255) aTCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCtt < 1:1223611/76‑1 (MQ=255) tCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTa < 2:209183/76‑1 (MQ=255) tCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTa > 2:965464/1‑76 (MQ=255) tCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTa < 1:244930/76‑1 (MQ=255) gCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTg < 1:45041/76‑1 (MQ=255) cATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGc > 1:128238/1‑76 (MQ=255) ttATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGccc < 2:1536217/76‑1 (MQ=255) tATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGccca < 1:1614073/76‑1 (MQ=255) tATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGccca > 2:1530358/1‑76 (MQ=255) tATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGccca < 2:1841867/76‑1 (MQ=255) tATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGccca > 1:461056/1‑76 (MQ=255) aTCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGcccac > 2:455958/1‑76 (MQ=255) tGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGcccaccca > 2:1088289/1‑76 (MQ=255) tGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGcccaccca < 2:1553971/76‑1 (MQ=255) gAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCat > 1:1247149/1‑76 (MQ=255) gAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCat > 1:1754560/1‑76 (MQ=255) tAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATttc > 2:1638164/1‑76 (MQ=255) aaaaCACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATttcg > 2:604866/1‑76 (MQ=255) cacTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATttcgttcg < 1:554031/76‑1 (MQ=255) acTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGa > 1:1633064/1‑76 (MQ=255) acTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGa > 1:1308754/1‑76 (MQ=255) cTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAg > 2:1720978/1‑76 (MQ=255) cTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAg > 1:1279902/1‑76 (MQ=255) aTCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCa > 1:1366036/1‑76 (MQ=255) cAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATc > 1:1256974/1‑76 (MQ=255) cAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATc > 1:199201/1‑76 (MQ=255) aaTAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCt < 2:1811338/76‑1 (MQ=255) aaGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCttcc > 1:1634760/1‑74 (MQ=255) aaGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTAc > 2:229427/1‑76 (MQ=255) aaGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTAc > 1:392119/1‑76 (MQ=255) aGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTAcc < 2:1067574/76‑1 (MQ=255) gTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTAccc < 1:1290206/76‑1 (MQ=255) gTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTAccc < 2:536160/76‑1 (MQ=255) gTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTAccc < 1:1812190/76‑1 (MQ=255) ttGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCa < 2:1541355/76‑1 (MQ=255) ttGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCa > 1:1470031/1‑76 (MQ=255) tGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAg > 2:1873010/1‑76 (MQ=255) tGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAg > 1:356471/1‑76 (MQ=255) ggAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAgg > 2:1680871/1‑76 (MQ=255) ggAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAgg < 1:1250623/76‑1 (MQ=255) aGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAGgcg > 2:221702/1‑76 (MQ=255) aGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAGgcg < 1:701859/76‑1 (MQ=255) cATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAGGCGCaa > 2:316261/1‑76 (MQ=255) aTTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAGGCGCAat > 1:545524/1‑76 (MQ=255) ttACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAGGCGCAata > 1:232600/1‑76 (MQ=255) aCCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAGGCGCAATATg < 1:1125322/76‑1 (MQ=255) ccACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAGGCGCAATATGa > 1:1323000/1‑76 (MQ=255) | CGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACGGCTTTTAAAGGCTTAACCCCTTATCTGCCCACCCATATTTCGTTCGAGCATCTTACCCAGGCGCAATATGA > REL606/4551373‑4551520 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |