| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 433,624 | Δ2 bp :: IS186 (–) +8 bp | coding (119‑126/273 nt) | hupB → | HU, DNA‑binding transcriptional regulator, beta subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 429504 = | NA (NA) | 60 (1.050) | 48/150 | 0.1 | 100% | noncoding (1341/1343 nt) | IS186 | repeat region |
| ? | REL606 | = 433631 | 0 (0.000) | coding (126/273 nt) | hupB | HU, DNA‑binding transcriptional regulator, beta subunit | |||||
| * | ? | REL606 | = 430844 | NA (NA) | 66 (1.200) | 46/144 | 0.1 | 100% | noncoding (1/1343 nt) | IS186 | repeat region |
| ? | REL606 | 433624 = | 0 (0.000) | coding (119/273 nt) | hupB | HU, DNA‑binding transcriptional regulator, beta subunit | |||||
GCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/429577‑429504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCAGCCGCAGCTTT < REL606/433631‑433557 GCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTA < 1:483639/76‑1 CGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTAC > 1:1426193/1‑76 CGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTAC > 1:1588551/1‑76 GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATC < 2:855206/76‑1 GCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCA < 2:1348935/76‑1 CATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAAGCCGTAAGTTAGCGCTTATGGACATCAT > 2:1343148/1‑76 ATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATC < 2:1806302/76‑1 GTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCC < 1:416171/76‑1 GTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCC > 1:759504/1‑76 TCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCT < 1:1615954/76‑1 CTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTT < 1:1065422/76‑1 CTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTT < 1:707064/76‑1 CTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTT < 2:441061/76‑1 CTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTT < 1:976038/76‑1 CTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTT < 2:1152877/76‑1 TAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCT > 2:307487/1‑76 AACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTT < 2:389648/76‑1 AACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTT > 2:1289272/1‑76 AACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTT > 1:646028/1‑76 AGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAG < 1:543279/76‑1 GCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAG < 2:1275702/76‑1 CACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGA > 2:381640/1‑76 CGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTC < 2:1057629/76‑1 GAGGCGTCACATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCA < 2:1036087/76‑1 AGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAG < 1:657882/76‑1 GGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGT < 2:690226/76‑1 CGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTA < 1:1765468/76‑1 GTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTAC > 2:1502067/1‑76 GCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGA > 2:697324/1‑76 TTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGC < 1:1307008/76‑1 TTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGC < 2:534610/76‑1 CAGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAA > 2:1742716/1‑76 AGATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAAT > 2:925500/1‑76 GATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATA < 2:21132/76‑1 ATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAG > 2:1309623/1‑76 ATGGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAG < 1:642020/76‑1 GGTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCA > 2:106877/1‑76 GTTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCAT < 2:1568257/76‑1 TTCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATC < 1:1240842/76‑1 TCAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCT < 1:1289272/76‑1 CAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTA < 1:1036640/76‑1 CAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTA < 1:654556/76‑1 CAACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTA < 1:201660/76‑1 AACCCTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAA > 2:1694794/1‑76 CTTAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCA < 1:216164/76‑1 TAAGTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACG < 1:111206/76‑1 GTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCC < 1:804659/76‑1 GTTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCC > 2:630095/1‑76 TTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCA < 1:365023/76‑1 TTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCA < 2:1374437/76‑1 TTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCA < 1:131131/76‑1 TTAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCA > 1:1156287/1‑76 TAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCAG > 1:985629/1‑76 TAGCGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCAG > 1:985650/1‑76 CGCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCAGCCG < 2:1534509/76‑1 GCTTATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCAGCCGC > 1:216655/1‑76 ATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCAGCCGCAGCT > 1:1462816/1‑76 ATGTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCAGCCGCAGCT < 1:1304909/76‑1 GTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCAGCCGCAGCTTT > 2:355732/1‑76 GTACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCAGCCGCAGCTTT < 2:775320/76‑1 GCGAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/429577‑429504‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TACATCATCCCCTTCTTTCAGAGATTCAGTTACGGAAGCAATAATAGCATCTAACGCACGGCCAGCCGCAGCTTT < REL606/433631‑433557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |