| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 433,624 | Δ2 bp :: IS186 (–) +8 bp | coding (119‑126/273 nt) | hupB → | HU, DNA‑binding transcriptional regulator, beta subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 429504 = | NA (NA) | 60 (1.050) | 48/150 | 0.1 | 100% | noncoding (1341/1343 nt) | IS186 | repeat region |
| ? | REL606 | = 433631 | 0 (0.000) | coding (126/273 nt) | hupB | HU, DNA‑binding transcriptional regulator, beta subunit | |||||
| * | ? | REL606 | = 430844 | NA (NA) | 66 (1.200) | 46/144 | 0.1 | 100% | noncoding (1/1343 nt) | IS186 | repeat region |
| ? | REL606 | 433624 = | 0 (0.000) | coding (119/273 nt) | hupB | HU, DNA‑binding transcriptional regulator, beta subunit | |||||
Only 100 of 122 total aligned reads displayed.
TAAAGCTGCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAACCCGCAGACCGGTAAA > REL606/433556‑433706 | tAAAGCTGCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTa < 2:63579/76‑1 (MQ=255)gagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTa < 1:1719802‑M2/8‑1 (MQ=255) aGCTGCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcat > 1:1462816‑M2/1‑73 (MQ=255) aGCTGCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcat < 1:1304909‑M2/76‑4 (MQ=255) aattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCAc > 1:496287‑M2/65‑76 (MQ=255) aattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCAc < 1:1621752‑M2/12‑1 (MQ=255) tcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTgg > 1:151030‑M2/62‑76 (MQ=255) gCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagc > 1:216655‑M2/1‑69 (MQ=255) catcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGt < 1:775103‑M2/16‑1 (MQ=255) catcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGt > 1:1383816‑M2/61‑76 (MQ=255) catcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGt < 2:707352‑M2/16‑1 (MQ=255) catcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGt < 1:369132‑M2/16‑1 (MQ=255) cGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcg < 2:1534509‑M2/76‑9 (MQ=255) atcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTa < 1:879333‑M2/17‑1 (MQ=255) cTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgcta > 1:985629‑M2/1‑65 (MQ=255) tGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaa > 1:1156287‑M2/1‑64 (MQ=255) tGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaa < 1:365023‑M2/76‑13 (MQ=255) tGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaa < 1:131131‑M2/76‑13 (MQ=255) tGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaa < 2:1374437‑M2/76‑13 (MQ=255) ggCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaac > 2:630095‑M2/1‑63 (MQ=255) ggCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaac < 1:804659‑M2/76‑14 (MQ=255) gcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGtt < 1:75407‑M2/21‑1 (MQ=255) cacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTGGCACTGGTAGGttt > 2:1079282‑M2/55‑76 (MQ=255) cGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaactta < 1:111206‑M2/76‑17 (MQ=255) ttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGt > 1:489217‑M2/51‑76 (MQ=255) tGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaag < 1:216164‑M2/76‑19 (MQ=255) aaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTAc > 1:508350‑M2/49‑76 (MQ=255) ttAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggtt > 2:1694794‑M2/1‑54 (MQ=255) atcatatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACtt < 1:430262‑M2/30‑1 (MQ=255) tAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttg < 1:201660‑M2/76‑24 (MQ=255) tAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttg < 1:654556‑M2/76‑24 (MQ=255) tAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttg < 1:1036640‑M2/76‑24 (MQ=255) catatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACtttt > 2:300178‑M2/45‑76 (MQ=255) catatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACtttt < 1:1805910‑M2/32‑1 (MQ=255) gATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaa < 1:1240842‑M2/76‑26 (MQ=255) atatcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTg > 2:733184‑M2/44‑76 (MQ=255) aTGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaac < 2:1568257‑M2/76‑27 (MQ=255) tGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaacc > 2:106877‑M2/1‑49 (MQ=255) atcaggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGcc > 1:1044564‑M2/42‑76 (MQ=255) cTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccat > 2:1309623‑M2/1‑47 (MQ=255) cTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccat < 1:642020‑M2/76‑30 (MQ=255) tattatTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccatc < 2:21132‑M2/76‑31 (MQ=255) aggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGtt < 2:1550222‑M2/38‑1 (MQ=255) aggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGtt > 1:877384‑M2/39‑76 (MQ=255) aggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGtt < 2:520154‑M2/38‑1 (MQ=255) ggcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTa < 1:1753867‑M2/39‑1 (MQ=255) attattGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccatct > 2:925500‑M2/1‑45 (MQ=255) ttattGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccatctg > 2:1742716‑M2/1‑44 (MQ=255) gcgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTaa < 1:499872‑M2/40‑1 (MQ=255) cgtaataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTaaa < 2:1027412‑M2/41‑1 (MQ=255) taataccacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAaga < 1:1175543‑M2/43‑1 (MQ=255) aataccacagcccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAagag < 1:712730‑M2/44‑1 (MQ=255) gCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaa < 1:1307008‑M2/76‑38 (MQ=255) accacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGt < 1:1702114‑M2/47‑1 (MQ=255) accacaacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGt > 1:1047583‑M2/30‑76 (MQ=255) tCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgc > 2:697324‑M2/1‑36 (MQ=255) gTAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgac > 2:1502067‑M2/1‑33 (MQ=255) caacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGtgctg < 1:1490800‑M2/51‑1 (MQ=255) tAACTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacg < 1:1765468‑M2/76‑45 (MQ=255) aacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGtgctgc > 1:1575382‑M2/25‑76 (MQ=255) aacccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGtgctgc < 1:1331668‑M2/52‑1 (MQ=255) acccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGcc > 2:563456‑M2/24‑76 (MQ=255) cccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGccc > 2:1169264‑M2/23‑76 (MQ=255) ccttaagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCg > 1:571695‑M2/22‑76 (MQ=255) cTGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcct < 1:657882‑M2/76‑48 (MQ=255) tGAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgtgacgcctc < 2:1036087‑M2/76‑49 (MQ=255) gAATCTCTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcg < 2:1057629‑M2/76‑50 (MQ=255) aagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACt < 2:772361‑M2/59‑1 (MQ=255) aagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACt < 1:1195388‑M2/59‑1 (MQ=255) aagttagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACt < 2:620995‑M2/59‑1 (MQ=255) aagtgagcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACt < 2:772378‑M2/59‑1 (MQ=255) tctcTGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtg > 2:381640‑M2/1‑24 (MQ=255) ctctGAAAGAAGGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgc < 2:1275702‑M2/76‑54 (MQ=255) agcgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCg < 2:1393066‑M2/64‑1 (MQ=255) cgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCa > 2:233853‑M2/11‑76 (MQ=255) cgcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCa > 2:49296‑M2/11‑76 (MQ=255) gcttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCaa < 1:1252580‑M2/67‑1 (MQ=255) aagaagGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgtt > 2:1289272‑M2/1‑17 (MQ=255) aagaagGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgtt > 1:646028‑M2/1‑17 (MQ=255) aagaagGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgtt < 2:389648‑M2/76‑60 (MQ=255) cttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAAc < 2:1788484‑M2/68‑1 (MQ=255) agaagGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgtta > 2:307487‑M2/1‑16 (MQ=255) ttatgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAAcc > 2:289487‑M2/8‑76 (MQ=255) aagGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaag < 2:441061‑M2/76‑63 (MQ=255) aagGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaag < 1:1065422‑M2/76‑63 (MQ=255) aagGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaag < 1:976038‑M2/76‑63 (MQ=255) aagGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaag < 2:1152877‑M2/76‑63 (MQ=255) atgggATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAACCCg > 1:1735990‑M2/6‑76 (MQ=255) agGGGATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaaga < 1:1615954‑M2/76‑64 (MQ=255) ggggATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagac < 1:416171‑M2/76‑65 (MQ=255) ggggATGATGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagac > 1:759504‑M2/1‑12 (MQ=255) gatgatGTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgat < 2:1806302‑M2/76‑68 (MQ=255) atgatgTCcataagcgctaacttacggcttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatg > 2:1343148‑M2/1‑8 (MQ=255) tgatgTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgc < 2:1348935‑M2/76‑70 (MQ=255) gatgTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcc < 2:855206‑M2/76‑71 (MQ=255) tgTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAACCCGCAGACCGGt > 1:420966/1‑76 (MQ=255) gTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcg > 1:1426193‑M2/1‑3 (MQ=255) gTAcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcg > 1:1588551‑M2/1‑3 (MQ=255) aGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAACCCGCAGACCGGTaaa > 2:850545/1‑76 (MQ=255) aGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAACCCGCAGACCGGTaaa > 2:955860/1‑76 (MQ=255) | TAAAGCTGCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAACCCGCAGACCGGTAAA > REL606/433556‑433706 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |