| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 1519141 = | 66 (1.020) | 5 (0.080) | 4/138 | 7.6 | 6.9% | coding (725/957 nt) | yddK | hypothetical protein |
| ? | REL606 | 1519345 = | 74 (1.240) | coding (521/957 nt) | yddK | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGGTATTGCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACTTACATTTCTGC > REL606/1519270‑1519420 | aGGTATTGCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACtg < 1:305833/76‑1 (MQ=255) gTATTGCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACtgat > 2:1031480/1‑76 (MQ=255) tATTGCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACtgatg < 1:176991/76‑1 (MQ=255) aTTGCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACtgatga < 1:1026238/76‑1 (MQ=255) aTTGCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACtgatga > 2:1816712/1‑76 (MQ=255) aTTGCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACtgatga < 1:1863597/76‑1 (MQ=255) ttGCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGaa < 2:814342/76‑1 (MQ=255) gCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAg < 1:292102/76‑1 (MQ=255) gCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAg < 1:377061/76‑1 (MQ=255) aGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGcc < 2:446963/76‑1 (MQ=255) aGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGcc < 1:1806836/76‑1 (MQ=255) ccATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACCGATGAAAGCcta < 2:1810531/76‑1 (MQ=255) aTTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCctatc < 2:950916/76‑1 (MQ=255) tCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGCGCCGCACTAAAATAAGTTACTGATGAAAGCctatcta < 2:340784/76‑1 (MQ=255) cGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCctatctat < 2:54348/76‑1 (MQ=255) cGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCctatctat > 1:1735383/1‑76 (MQ=255) gCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCtata < 1:1322041/76‑1 (MQ=255) aaGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATc < 2:553023/76‑1 (MQ=255) aaGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATc < 2:495584/76‑1 (MQ=255) aaGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTAGATc < 2:495577/76‑1 (MQ=255) aGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCa < 2:532547/76‑1 (MQ=255) aTTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAat < 2:700813/76‑1 (MQ=255) aTTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAat > 1:161879/1‑76 (MQ=255) ttCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAata > 2:133066/1‑76 (MQ=255) tCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAatat < 2:754601/76‑1 (MQ=255) tCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAatat < 1:346046/76‑1 (MQ=255) tCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAatat < 1:931803/76‑1 (MQ=255) tCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATACCAatat < 1:568585/76‑1 (MQ=255) cTACTTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATAtt > 1:758684/1‑76 (MQ=255) cTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATAtt < 2:1766967/76‑1 (MQ=255) aaTTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTc > 1:2002705/1‑76 (MQ=255) aaTTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTc > 1:191951/1‑76 (MQ=255) aTTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCt < 2:1536650/76‑1 (MQ=255) aTTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCt > 2:1645073/1‑76 (MQ=255) aTTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCt > 1:1977898/1‑76 (MQ=255) ttGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTg > 1:1121716/1‑76 (MQ=255) actacaAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTga > 2:962792/4‑76 (MQ=255) gCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTgag < 1:1962330/76‑1 (MQ=255) cacaAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTgaga > 1:1520079/1‑76 (MQ=255) acaAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGagag < 1:2006614/76‑1 (MQ=255) caAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGc < 1:593587/76‑1 (MQ=255) caAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGc < 1:615494/76‑1 (MQ=255) caAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGc < 1:1891571/76‑1 (MQ=255) aCTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCatt > 2:1549682/1‑76 (MQ=255) ctctAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCatta < 1:586411/76‑1 (MQ=255) ctctAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCatta < 1:29985/76‑1 (MQ=255) tctAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCattat > 2:1734968/1‑76 (MQ=255) ctAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCattatt < 1:1557762/76‑1 (MQ=255) ctAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCattatt > 1:187902/1‑76 (MQ=255) ctAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCattatt > 2:1709791/1‑76 (MQ=255) aGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCattattat > 1:1350243/1‑76 (MQ=255) aGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCattattat > 1:57583/1‑76 (MQ=255) gTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCattattatt > 2:1296288/1‑76 (MQ=255) ttGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTc > 1:1115252/1‑76 (MQ=255) tGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCa > 1:1492634/1‑76 (MQ=255) gATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCAt < 2:1738863/76‑1 (MQ=255) gATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCAt < 1:57623/76‑1 (MQ=255) gATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCAt > 1:255779/1‑76 (MQ=255) tATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGa < 1:1513163/76‑1 (MQ=255) gtgCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGatat < 1:20464/76‑1 (MQ=255) gCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGatatat > 2:744320/1‑76 (MQ=255) cACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATgtgt < 1:239026/76‑1 (MQ=255) cACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATgtgt > 2:1341732/1‑76 (MQ=255) cACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATgtgt < 2:489935/76‑1 (MQ=255) cACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATgtgt < 2:489921/76‑1 (MQ=255) cTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTaa < 2:1036753/76‑1 (MQ=255) tAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAAt < 1:1771462/76‑1 (MQ=255) tAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAAt < 2:261524/76‑1 (MQ=255) aTAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACtt < 1:1208724/76‑1 (MQ=255) tAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACTTa > 2:650500/1‑76 (MQ=255) aaGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACTTAc > 2:1463024/1‑76 (MQ=255) aaGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACTTAc > 1:1219405/1‑76 (MQ=255) aGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACTTACa > 1:1005254/1‑76 (MQ=255) aGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACTTACa < 1:1524129/76‑1 (MQ=255) tACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACTTACAttt < 2:198140/76‑1 (MQ=255) tgatgaAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACTTACATTTCTg > 1:279010/1‑76 (MQ=255) tgatgaAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACTTACATTTCTg > 2:1274160/1‑76 (MQ=255) gatgaAAGCCTATGTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACTTACATTTCTGc < 2:1428846/76‑1 (MQ=255) gatgaAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACTTACATTTCTGc < 2:1126537/76‑1 (MQ=255) | AGGTATTGCAGCCATTCGCAAGATTCTAATTGCACAAACTCTAGTTGATTATGTGCCGCACTAAAATAAGTTACTGATGAAAGCCTATCTATATCAATATTTCTGAGAGCATTATTATTCATAGATATATGTGTAATACTTACATTTCTGC > REL606/1519270‑1519420 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |