| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,124,928 | Δ2 bp :: IS186 (–) +8 bp | coding (1025‑1032/1536 nt) | mdoG → | glucan biosynthesis protein, periplasmic |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 430844 | NA (NA) | 32 (0.610) | 25/144 | 1.3 | 100% | noncoding (1/1343 nt) | IS186 | repeat region |
| ? | REL606 | 1124928 = | 0 (0.000) | coding (1025/1536 nt) | mdoG | glucan biosynthesis protein, periplasmic | |||||
| * | ? | REL606 | = 592055 | NA (NA) | 52 (0.950) | 43/150 | 0.2 | 100% | noncoding (1341/1343 nt) | IS186 | repeat region |
| ? | REL606 | = 1124935 | 0 (0.000) | coding (1032/1536 nt) | mdoG | glucan biosynthesis protein, periplasmic | |||||
ATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/430770‑430844‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCTT > REL606/1124928‑1124999 ATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGA > 1:841503/1‑76 TCGTGAGAGTAAGTCGTCGGCACGTTAAATCATCTCAGGCGTAATACCACAACCCTTAAGTNAGCGCTTATGGGAG > 1:1522478/1‑76 CGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGT > 1:311954/1‑76 GTGAGAGTAATTCATCGGCACGTTAAATCATATCAGTCGTAATACTACAACCCTTAAGTTATCGCTTATGGTAGTG > 1:29919/1‑76 GAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGGT < 1:1210479/76‑1 GAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGCGGGGT < 1:113135/76‑1 GTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGGTAA < 1:245369/76‑1 AATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGGTAAAG < 2:710975/76‑1 TCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGGTAAAGGCA < 2:543800/76‑1 CATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTCAGTGCTTATGGGAGTGGGGTAAAGGCAG > 1:281357/1‑76 TCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGGTAAAGGCAGCG < 1:1500673/76‑1 CGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGGTAAAGGCAGCGT > 1:911040/1‑76 CGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTATAGCTTATGGGAGTGGGGTAAACGCANCGTTGAGC > 2:290553/1‑76 TAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGGTAAAGGCAGCGTTGAGCTGG < 2:1542653/76‑1 AAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGT > 2:886647/1‑76 CATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAA < 1:1159179/76‑1 ATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATT > 1:579081/1‑76 GTAATACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCA > 1:534483/1‑76 AATACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGCTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAAC > 1:1059059/1‑76 TACCACAACCCTTAAGTTATCGCTTATGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGA > 1:1501824/1‑76 TACCACAACCCTTAAGTTAGCGCTTATGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGA > 1:774447/1‑76 CCACAGCCCTTAAGTTAGCGCTTATGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATG < 2:68162/76‑1 AACCCTTAAGTTAGCGCTTAAGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAAC < 1:232444/76‑1 CCTTAAGTTAGCGCTTATGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGCTGAAACCAA > 2:1289151/1‑76 TTAGCGCTTATGGGAGTGGGGTAAANGTAGCGTTGAACTGGTGGAATNTCCGACCAACGATGAAACCAACGATAAC < 1:260651/76‑1 TTAGCGCTTATGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAAC > 1:1255673/1‑76 TAGCGCTTATGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACA > 2:389047/1‑76 AGCGCTTATGGGAGTGGGGTAATGGNAACGTTGAGCTGGTGGAAATTNCAAACAACGATGAAACCAACGATAACAT < 1:262633/76‑1 ATGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCT < 2:1024635/76‑1 TGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCTT < 2:1587692/76‑1 TGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCTT > 1:697778/1‑76 TGGGAGGGGGGGAAAGGCAGCGTTGAGCTGGGGGGAATTCCAACCAAAGATGAAACCAACGATAACATCGTCGCTT > 2:1477839/1‑76 ATCGTGAGAGTAATTCATCGGCACGTTAAATCATATCAGGCGTAATACCACAACCCTTAAGTTAGCGCTTATGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/430770‑430844‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCTT > REL606/1124928‑1124999 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |