| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,124,928 | Δ2 bp :: IS186 (–) +8 bp | coding (1025‑1032/1536 nt) | mdoG → | glucan biosynthesis protein, periplasmic |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 430844 | NA (NA) | 32 (0.610) | 25/144 | 1.3 | 100% | noncoding (1/1343 nt) | IS186 | repeat region |
| ? | REL606 | 1124928 = | 0 (0.000) | coding (1025/1536 nt) | mdoG | glucan biosynthesis protein, periplasmic | |||||
| * | ? | REL606 | = 592055 | NA (NA) | 52 (0.950) | 43/150 | 0.2 | 100% | noncoding (1341/1343 nt) | IS186 | repeat region |
| ? | REL606 | = 1124935 | 0 (0.000) | coding (1032/1536 nt) | mdoG | glucan biosynthesis protein, periplasmic | |||||
GAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/591984‑592055‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAGATCTTCAAAGCGGGA < REL606/1124935‑1124861 GAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCC < 1:1366881/76‑1 AGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCC > 2:1098379/1‑76 AGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCC < 2:1180964/76‑1 GGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCA > 2:698607/1‑76 GCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCAC < 1:1596266/76‑1 GCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCAC < 1:204899/76‑1 CATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACT > 1:337710/1‑76 CANCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATTACCCCNCT < 2:1439275/76‑1 TCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCC < 1:578658/76‑1 CGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCC > 1:1227581/1‑76 TCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCn < 1:334973/76‑2 CTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTT < 2:410595/76‑1 CTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTT < 2:158646/76‑1 CTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTT < 2:725940/76‑1 CTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTT < 2:798543/76‑1 TTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTT < 2:350075/76‑1 TAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTC > 2:1531463/1‑76 ACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGG < 2:1363269/76‑1 AGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGT < 1:445812/76‑1 GGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTC < 1:1299829/76‑1 CACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCAC > 2:131863/1‑76 CGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCATTTCGGAGTCACCCA > 1:299418/1‑76 AGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATG < 2:80826/76‑1 GCGTCGCATTCTTCATATGGTTCAACCCTTAAGTGAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCG < 1:1457023/76‑1 TCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTT < 1:871716/76‑1 CGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTG < 2:309214/76‑1 GCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGG > 2:439385/1‑76 CATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGA > 2:673240/1‑76 TTNTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCACTTGGNCG < 2:1451926/76‑1 TTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACG > 1:887703/1‑76 TCTTCGGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCAGGCGCTTGGACGG < 2:60968/76‑1 TCAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCTCCCATGCGCTTGGACGGAGA < 2:145878/76‑1 CAGATGGTTCAGCCCGTAAGTTAGCGCTTGTGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGAT < 2:594453/76‑1 CAGATGGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGAT < 2:159563/76‑1 AGATGGTTCAACCCTTAAGTTAGCGCTGATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATC < 1:856477/76‑1 GGTTCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAA < 2:893352/76‑1 TTCAACCCTTAAGTTAGCGCTTGTGACNCCNCGNCCATTTCNGAGTCAGCCATGCGCTTGGACGGAGATCGTAACG < 1:1534297/76‑1 TCAACCCTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGA > 2:891964/1‑76 CTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCG > 2:1289167/1‑76 CTTAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCG < 2:1178844/76‑1 TTAAGTTAGCGCTTATGACCCCAGTCCCCTTTCGGAGTCACGTATGCGATTAGACGGAGATCGTAACNATCATCGA > 2:287291/1‑76 TAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAG < 2:1671649/76‑1 TAAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAG < 2:1086823/76‑1 AAGTTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAGA < 2:1169920/76‑1 TTAGCGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAGATCT > 2:1088415/1‑76 CGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAGATCTTCAA > 1:668929/1‑76 CGCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAGATCTTCAA < 1:1015849/76‑1 GCTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAGATCTTCAAA > 2:1676722/1‑76 CTTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAGATCTTCAAAG > 1:1356734/1‑76 TTATGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAGATCTTCAAAGC < 1:1052317/76‑1 TGACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAGATCTTCAAAGCGGG > 1:977587/1‑76 GACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAGATCTTCAAAGCGCGA < 1:409120/76‑1 GAGGCATCGTCTTAACGAGGCACCGAGGCGTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/591984‑592055‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCCCACTCCCCTTTCGGAGTCACCCATGCGCTTGGACGGAGATCGTAACGATCATCGAGATCTTCAAAGCGGGA < REL606/1124935‑1124861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |