| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,124,928 | Δ2 bp :: IS186 (–) +8 bp | coding (1025‑1032/1536 nt) | mdoG → | glucan biosynthesis protein, periplasmic |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 430844 | NA (NA) | 32 (0.610) | 25/144 | 1.3 | 100% | noncoding (1/1343 nt) | IS186 | repeat region |
| ? | REL606 | 1124928 = | 0 (0.000) | coding (1025/1536 nt) | mdoG | glucan biosynthesis protein, periplasmic | |||||
| * | ? | REL606 | = 592055 | NA (NA) | 52 (0.950) | 43/150 | 0.2 | 100% | noncoding (1341/1343 nt) | IS186 | repeat region |
| ? | REL606 | = 1124935 | 0 (0.000) | coding (1032/1536 nt) | mdoG | glucan biosynthesis protein, periplasmic | |||||
CTCCCGCTTTGAAGATCTCGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCTTACTGGACG > REL606/1124860‑1125007 | gagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggAGTGGGGt < 1:1210479‑M2/8‑1 (MQ=255)gagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggAGCGGGGt < 1:113135‑M2/8‑1 (MQ=255) tCGCGCTTTGAAGATCTCGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTc < 1:409120‑M2/76‑2 (MQ=255) gtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggAGTGGGGTaa < 1:245369‑M2/10‑1 (MQ=255) cccGCTTTGAAGATCTCGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTca > 1:977587‑M2/1‑74 (MQ=255) aattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggAGTGGGGTAAAg < 2:710975‑M2/12‑1 (MQ=255) gCTTTGAAGATCTCGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataa < 1:1052317‑M2/76‑6 (MQ=255) cTTTGAAGATCTCGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataag > 1:1356734‑M2/1‑70 (MQ=255) tttGAAGATCTCGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagc > 2:1676722‑M2/1‑69 (MQ=255) tcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggAGTGGGGTAAAGGCa < 2:543800‑M2/15‑1 (MQ=255) ttGAAGATCTCGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcg < 1:1015849‑M2/76‑9 (MQ=255) ttGAAGATCTCGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcg > 1:668929‑M2/1‑68 (MQ=255) catcggcacgttaaatcatatcaggcgtaataccacaacccttaagtcagtgcttatgggAGTGGGGTAAAGGCAg > 1:281357‑M2/61‑76 (MQ=255) tcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggAGTGGGGTAAAGGCAGCg < 1:1500673‑M2/18‑1 (MQ=255) cggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggAGTGGGGTAAAGGCAGCGt > 1:911040‑M2/58‑76 (MQ=255) aGATCTCGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaa > 2:1088415‑M2/1‑64 (MQ=255) tctcGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaactt < 2:1169920‑M2/76‑16 (MQ=255) ctcGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaactta < 2:1671649‑M2/76‑17 (MQ=255) ctcGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaactta < 2:1086823‑M2/76‑17 (MQ=255) cgttaaatcatatcaggcgtaataccacaacccttaagttatagcttatgggAGTGGGGTAAACGCANCGTTGAGc > 2:290553‑M2/53‑76 (MQ=255) tcGATGATNGTTACGATCTCCGTCTAATCGCATACGTGACTCCGAAAGGGGACTGGGGTcataagcgctaacttaa > 2:287291‑M2/1‑59 (MQ=255) cGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaag < 2:1178844‑M2/76‑19 (MQ=255) cGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaag > 2:1289167‑M2/1‑58 (MQ=255) taaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggAGTGGGGTAAAGGCAGCGTTGAGCtgg < 2:1542653‑M2/27‑1 (MQ=255) aaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggAGTGGGGTAAAGGCAGCGTTGAGCtggt > 2:886647‑M2/49‑76 (MQ=255) tCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttga > 2:891964‑M2/1‑52 (MQ=255) catatcaggcgtaataccacaacccttaagttagcgcttatgggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGaa < 1:1159179‑M2/32‑1 (MQ=255) cGTTACGATCTCCGTCCAAGCGCATGGCTGACTCNGAAATGGNCGNGGNGTcacaagcgctaacttaagggttgaa < 1:1534297‑M2/76‑26 (MQ=255) ttACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaacc < 2:893352‑M2/76‑28 (MQ=255) atcaggcgtaataccacaacccttaagttagcgcttatgggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAAtt > 1:579081‑M2/42‑76 (MQ=255) gATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcatcagcgctaacttaagggttgaaccatct < 1:856477‑M2/76‑32 (MQ=255) aTCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctg < 2:159563‑M2/76‑33 (MQ=255) aTCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcacaagcgctaacttacgggctgaaccatctg < 2:594453‑M2/76‑33 (MQ=255) tctcCGTCCAAGCGCATGGGAGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctga < 2:145878‑M2/76‑34 (MQ=255) gtaataccacaacccttaagttagcgcttatgggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTccaacca > 1:534483‑M2/35‑76 (MQ=255) ccGTCCAAGCGCCTGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatccgaaga < 2:60968‑M2/76‑37 (MQ=255) aataccacaacccttaagttagcgcttatgggAGTGGGCTAAAGGCAGCGTTGAGCTGGTGGAAATTCcaaccaac > 1:1059059‑M2/33‑76 (MQ=255) cGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaa > 1:887703‑M2/1‑39 (MQ=255) cGNCCAAGTGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaanaa < 2:1451926‑M2/76‑38 (MQ=255) taccacaacccttaagttatcgcttatgggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGa > 1:1501824‑M2/31‑76 (MQ=255) taccacaacccttaagttagcgcttatgggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGa > 1:774447‑M2/31‑76 (MQ=255) tCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatg > 2:673240‑M2/1‑37 (MQ=255) ccacagcccttaagttagcgcttatgggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATg < 2:68162‑M2/48‑1 (MQ=255) ccAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgc > 2:439385‑M2/1‑36 (MQ=255) cAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcg < 2:309214‑M2/76‑42 (MQ=255) aaGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcga < 1:871716‑M2/76‑43 (MQ=255) aacccttaagttagcgcttaagggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAAc < 1:232444‑M2/52‑1 (MQ=255) cgcATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctcacttaagggttgaaccatatgaagaatgcgacgc < 1:1457023‑M2/76‑46 (MQ=255) ccttaagttagcgcttatgggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGCTGAAACCaa > 2:1289151‑M2/22‑76 (MQ=255) cATGGGTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcct < 2:80826‑M2/76‑48 (MQ=255) tGGGTGACTCCGAAATGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcg > 1:299418‑M2/1‑27 (MQ=255) gTGACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtg > 2:131863‑M2/1‑24 (MQ=255) ttagcgcttatgggAGTGGGGTAAANGTAGCGTTGAACTGGTGGAATNTCCGACCAACGATGAAACCAACGATAAc < 1:260651‑M2/62‑1 (MQ=255) ttagcgcttatgggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAAc > 1:1255673‑M2/15‑76 (MQ=255) gACTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcc < 1:1299829‑M2/76‑55 (MQ=255) tagcgcttatgggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACa > 2:389047‑M2/14‑76 (MQ=255) aCTCCGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcct < 1:445812‑M2/76‑56 (MQ=255) agcgcttatgggAGTGGGGTAATGGNAACGTTGAGCTGGTGGAAATTNCAAACAACGATGAAACCAACGATAACAt < 1:262633‑M2/64‑1 (MQ=255) ccGAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgt < 2:1363269‑M2/76‑59 (MQ=255) gAAAGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgtta > 2:1531463‑M2/1‑16 (MQ=255) aaaGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaa < 2:350075‑M2/76‑62 (MQ=255) aaGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaag < 2:410595‑M2/76‑63 (MQ=255) aaGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaag < 2:798543‑M2/76‑63 (MQ=255) aaGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaag < 2:725940‑M2/76‑63 (MQ=255) aaGGGGAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaag < 2:158646‑M2/76‑63 (MQ=255) nggggaGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaaga < 1:334973‑M2/75‑64 (MQ=255) atgggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCt < 2:1024635‑M2/71‑1 (MQ=255) tgggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCtt > 1:697778‑M2/5‑76 (MQ=255) tgggAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCtt < 2:1587692‑M2/72‑1 (MQ=255) tgggAGGGGGGGAAAGGCAGCGTTGAGCTGGGGGGAATTCCAACCAAAGATGAAACCAACGATAACATCGTCGCtt > 2:1477839‑M2/5‑76 (MQ=255) gggAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacg > 1:1227581‑M2/1‑11 (MQ=255) ggAGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacga < 1:578658‑M2/76‑67 (MQ=255) aGTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatg > 1:337710‑M2/1‑8 (MQ=255) aGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCTTACTg < 1:1285634/76‑1 (MQ=255) aGNGGGGTaataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgntg < 2:1439275‑M2/76‑69 (MQ=255) gTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgc < 1:1596266‑M2/76‑70 (MQ=255) gTGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgc < 1:204899‑M2/76‑70 (MQ=255) tGGGGTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcc > 2:698607‑M2/1‑6 (MQ=255) tGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCTTACTGGa > 1:335759/1‑76 (MQ=255) ggggTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcct < 2:1180964‑M2/76‑72 (MQ=255) ggggTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcct > 2:1098379‑M2/1‑5 (MQ=255) gggTcataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctc < 1:1366881‑M2/76‑73 (MQ=255) | CTCCCGCTTTGAAGATCTCGATGATCGTTACGATCTCCGTCCAAGCGCATGGGTGACTCCGAAAGGGGAGTGGGGTAAAGGCAGCGTTGAGCTGGTGGAAATTCCAACCAACGATGAAACCAACGATAACATCGTCGCTTACTGGACG > REL606/1124860‑1125007 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |