New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	4097350 =	24 (0.490)	59 (1.280)	44/142	0.1	73.9%	coding (223/846 nt)	glpF	glycerol facilitator
	?	REL606	= 4097374	19 (0.410)					coding (199/846 nt)	glpF	glycerol facilitator

ACTGGGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/4097426‑4097350 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTCCTTTTATCGT  <  REL606/4097374‑4097301                                                                                                                                                         ACTGGGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCA                                                                             <  1:767108/76‑1    GGGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTCCCATTGCATCT                                                                          <  1:1429932/76‑1    GGGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCT                                                                          >  2:928290/1‑76    GGGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCT                                                                          >  1:884963/1‑76    GGGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCT                                                                          >  2:1183121/1‑76    GGGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCT                                                                          >  1:174476/1‑76     GGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTT                                                                         <  2:298920/76‑1     GGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTT                                                                         <  1:1470274/76‑1     GGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTT                                                                         <  2:1275265/76‑1      GGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTA                                                                        <  1:1318386/76‑1       GGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAA                                                                       >  1:1046699/1‑76          GGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCC                                                                    <  1:579719/76‑1            CAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCG                                                                  <  2:296119/76‑1            CAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCC                                                                   <  2:1216791/75‑1            CAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCC                                                                   >  1:1216791/1‑75            CAACGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCC                                                                   <  2:1141641/75‑1            CAACGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCC                                                                   >  1:1141641/1‑75             AATGGCCATCTACCTGACCGCAGGGGGTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGC                                                                 >  2:996624/1‑76                GGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGT                                                              >  2:980807/1‑76                 GCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTT                                                             <  2:874313/76‑1                   CATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTAC                                                           >  2:199624/1‑76                    cTCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACC                                                          <  1:617849/75‑1                       TACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATT                                                       >  1:1087507/1‑76                       TACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATT                                                       >  2:636262/1‑76                        ACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTG                                                      >  2:822166/1‑76                           TGACCGCAGGGGTTTCTGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCAT                                                   >  1:1123727/1‑76                           TGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCAT                                                   <  2:1413279/76‑1                            GACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATT                                                  >  2:891107/1‑76                                      GTTTCCGGCGCGCATCTTAATCCCGCTGTTACTATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTT                                        <  2:1222524/76‑1                                       TTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTt                                       >  1:792890/1‑75                                       TTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTG                                       >  2:573455/1‑76                                       TTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTG                                       <  2:197091/76‑1                                       TTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTATTACCATTGCATTGTGGCTGTTTG                                       >  1:290682/1‑76                                       TTTCCGGCACGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTG                                       >  1:628461/1‑76                                        TTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGC                                      >  2:379467/1‑76                                          CCGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCT                                    <  1:927943/76‑1                                           CGGCGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTG                                   <  2:673154/76‑1                                              CGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTT                                <  2:1281688/76‑1                                              CGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTT                                >  2:1445196/1‑76                                              CGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTT                                <  2:982175/76‑1                                              CGCGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTT                                <  2:216568/76‑1                                                CGCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCG                              <  1:373887/76‑1                                                 GCATCTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGA                             <  1:1094156/76‑1                                                     CTTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAG                         <  2:343460/76‑1                                                      TTAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGC                        >  2:984291/1‑76                                                       TAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCG                       >  1:1496774/1‑76                                                       TAATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCG                       <  2:1483753/76‑1                                                        AATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGC                      >  2:939838/1‑76                                                        AATCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGC                      <  1:532723/76‑1                                                          TCCCGCTGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAA                    <  1:344340/76‑1                                                                TGTTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTAT              >  2:1548193/1‑76                                                                  TTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTC            <  1:1539730/76‑1                                                                  TTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTC            >  1:211729/1‑76                                                                  TTACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTC            >  2:1095424/1‑76                                                                   TACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTCC           >  2:541374/1‑76                                                                    ACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTCCT          <  2:1104399/76‑1                                                                    ACCATTGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTCCT          >  1:628439/1‑76                                                                         TGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTCCTTTTAT     >  1:127833/1‑76                                                                         TGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTCCTTTTAT     <  2:1472146/76‑1                                                                         TGCATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTCCTTTTAT     >  1:876218/1‑76                                                                            ATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTCCTTTTATCGT  >  2:170852/1‑76                                                                            ATCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTCCTTTTATCGT  <  2:1327145/76‑1                                                                                                                                                         ACTGGGGGTGGCAATGGCCATCTACCTGACCGCAGGGGTTTCCGGCGCGCATCTTAATCCCGCTGTTACCATTGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/4097426‑4097350 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatCTTAATCCCGCTGTTACCATTGCATTGTGGCTGTTTGCCTGTTTCGACAAGCGCAAAGTTATTCCTTTTATCGT  <  REL606/4097374‑4097301

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.