| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4097350 = | 24 (0.490) | 59 (1.280) | 44/142 | 0.1 | 73.9% | coding (223/846 nt) | glpF | glycerol facilitator |
| ? | REL606 | = 4097374 | 19 (0.410) | coding (199/846 nt) | glpF | glycerol facilitator | |||||
Only 100 of 122 total aligned reads displayed.
GCAGAAAGCGCCGGCAACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTGCCACCCCCAG > REL606/4097276‑4097425 | acgataaaaggaataactttgcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagAt < 2:1327145‑M1/2‑1 (MQ=255)acgataaaaggaataactttgcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagAt > 2:170852‑M1/75‑76 (MQ=255) gAAAGCGCCGGCAACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCAcaatgca > 1:127900/1‑76 (MQ=255) ataaaaggaataactttgcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCa < 2:1472146‑M1/5‑1 (MQ=255) ataaaaggaataactttgcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCa > 1:876218‑M1/72‑76 (MQ=255) ataaaaggaataactttgcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCa > 1:127833‑M1/72‑76 (MQ=255) aaaGCGCCGGCAACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCAcaatgcaa < 1:684206/76‑1 (MQ=255) aaGCGCCGGCAACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCAcaatgcact > 2:398675/1‑74 (MQ=255) aaGCGCCGGCAACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCAcaatgcaat < 1:842076/76‑1 (MQ=255) aggaataactttgcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGt > 1:628439‑M1/67‑76 (MQ=255) ggaataactttgcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTa > 2:541374‑M1/66‑76 (MQ=255) gaataactttgcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTaa > 1:211729‑M1/65‑76 (MQ=255) gaataactttgcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTaa > 2:1095424‑M1/65‑76 (MQ=255) ccGGCAACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTaa > 2:1331377/1‑76 (MQ=255) cGGCAACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAAc < 1:553753/76‑1 (MQ=255) cGGCAACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAACGCAATGGTAAc > 2:600662/1‑76 (MQ=255) ggCGACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCAAAACAGGCAAACAGCCACAATGCAATGGTAACa < 2:1154956/76‑1 (MQ=255) ggCAACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACa > 1:1518201/1‑76 (MQ=255) ggCAACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACa < 2:1229128/76‑1 (MQ=255) ggCAACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACa < 2:799558/76‑1 (MQ=255) ataactttgcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACa > 2:1548193‑M1/63‑76 (MQ=255) aCTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCgg < 2:907482/76‑1 (MQ=255) cTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCggg < 2:135016/76‑1 (MQ=255) ttgcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGa < 1:344340‑M1/20‑1 (MQ=255) ttGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGa < 2:1053054/76‑1 (MQ=255) gtgAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGAtt > 1:1049963/1‑76 (MQ=255) gtgAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGAtt < 2:1172055/76‑1 (MQ=255) gcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGAtt < 1:532723‑M1/22‑1 (MQ=255) gcgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGAtt > 2:939838‑M1/55‑76 (MQ=255) tgAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTa < 2:488573/76‑1 (MQ=255) cgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTa < 2:1483753‑M1/23‑1 (MQ=255) cgcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTa > 1:1496774‑M1/54‑76 (MQ=255) gcttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTaa > 2:984291‑M1/53‑76 (MQ=255) gAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTaa > 2:823885/1‑76 (MQ=255) gAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTaa > 2:525832/1‑76 (MQ=255) cttgtcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAg < 2:343460‑M1/25‑1 (MQ=255) aCGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGat < 2:1327145‑M2/76‑3 (MQ=255) tcgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATgc < 1:1094156‑M1/29‑1 (MQ=255) cgaaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATgcg < 1:373887‑M1/30‑1 (MQ=255) aTAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgca > 1:127833‑M2/1‑71 (MQ=255) aTAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgca > 1:876218‑M2/1‑71 (MQ=255) aaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATgcgcg < 2:982175‑M1/32‑1 (MQ=255) aaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATgcgcg < 2:216568‑M1/32‑1 (MQ=255) aaacaggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATgcgcg > 2:1445196‑M1/45‑76 (MQ=255) caggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCg < 2:673154‑M1/35‑1 (MQ=255) aGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggt < 2:1104399‑M2/76‑11 (MQ=255) aGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggt > 1:628439‑M2/1‑66 (MQ=255) aggcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCgg < 1:927943‑M1/36‑1 (MQ=255) gAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaa > 2:1095424‑M2/1‑64 (MQ=255) gAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaa < 1:1539730‑M2/76‑13 (MQ=255) gAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaa > 1:211729‑M2/1‑64 (MQ=255) gcaaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGaa > 2:379467‑M1/39‑76 (MQ=255) caaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGTGCCGGaaa > 1:628461‑M1/38‑76 (MQ=255) caaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGaaa > 2:573455‑M1/38‑76 (MQ=255) caaacagccacaatgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGaaa < 2:197091‑M1/39‑1 (MQ=255) aTAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaaca > 2:1548193‑M2/1‑62 (MQ=255) aaacagccacaatgcaatggtaacagcgggattaagATGCAATAGTAACAGCGGGATTAAGATGCGCGCCGGAAAc < 2:1222524‑M1/40‑1 (MQ=255) ttGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcggga < 1:344340‑M2/76‑21 (MQ=255) gcgcTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggatt < 1:532723‑M2/76‑23 (MQ=255) gcgcTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggatt > 2:939838‑M2/1‑54 (MQ=255) cgcTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggatta < 2:1483753‑M2/76‑24 (MQ=255) cgcTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggatta > 1:1496774‑M2/1‑53 (MQ=255) gcTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaa > 2:984291‑M2/1‑52 (MQ=255) cTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaag < 2:343460‑M2/76‑26 (MQ=255) atgcaatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCAGAAACCCCTGCGGTCa > 1:1123727‑M1/26‑76 (MQ=255) tGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCCGCCAg > 1:1133302/1‑76 (MQ=255) tCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgc < 1:1094156‑M2/76‑30 (MQ=255) caatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGt > 2:822166‑M1/23‑76 (MQ=255) cGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcg < 1:373887‑M2/76‑31 (MQ=255) aatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTa > 2:636262‑M1/22‑76 (MQ=255) aatggtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTa > 1:1087507‑M1/22‑76 (MQ=255) aaaCAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcgcg < 2:982175‑M2/76‑33 (MQ=255) aaaCAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcgcg > 2:1445196‑M2/1‑44 (MQ=255) aaaCAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcgcg < 2:1281688‑M2/76‑33 (MQ=255) gtaacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATg > 2:199624‑M1/18‑76 (MQ=255) aacagcgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGc < 2:874313‑M1/61‑1 (MQ=255) aGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcgcgccgg < 1:927943‑M2/76‑37 (MQ=255) cAAACAGCCACAATGCAATGGTAATAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcgcgccggaaa > 1:290682‑M2/1‑37 (MQ=255) cAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcgtgccggaaa > 1:628461‑M2/1‑37 (MQ=255) cAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcgcgccggaaa < 2:197091‑M2/76‑40 (MQ=255) cAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcgcgccggaaa > 2:573455‑M2/1‑37 (MQ=255) aaaacAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcgcgccggaaa > 1:792890‑M2/2‑37 (MQ=255) aaaCAGCCACAATGCAATGGTAACAGCGGGATTAAGatgcaatagtaacagcgggattaagatgcgcgccggaaac < 2:1222524‑M2/76‑41 (MQ=255) cgggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTg < 2:296119‑M1/66‑1 (MQ=255) gggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCGTTg < 2:1141641‑M1/66‑1 (MQ=255) gggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCGTTg > 1:1141641‑M1/10‑75 (MQ=255) gggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTg < 2:1216791‑M1/66‑1 (MQ=255) gggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTg > 1:1216791‑M1/10‑75 (MQ=255) ggattaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTGcc < 1:579719‑M1/68‑1 (MQ=255) ttaagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTGCCAcc > 1:1046699‑M1/6‑76 (MQ=255) taagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTGCCAccc < 1:1318386‑M1/72‑1 (MQ=255) aagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTGCCAcccc < 1:1470274‑M1/73‑1 (MQ=255) aagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTGCCAcccc < 2:1275265‑M1/73‑1 (MQ=255) aagATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTGCCAcccc < 2:298920‑M1/73‑1 (MQ=255) agATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTGCCAccccc > 1:174476‑M1/3‑76 (MQ=255) agATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTGCCAccccc > 2:928290‑M1/3‑76 (MQ=255) agATGCAATGGGAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTGCCAccccc < 1:1429932‑M1/74‑1 (MQ=255) aatgcaatgGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcgcgccggaaacccctgcggtc > 2:891107‑M2/1‑26 (MQ=255) atgcaatgGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcgcgccggaaacccctgcggtca < 2:1413279‑M2/76‑52 (MQ=255) atgcaatgGTAACAGCGGGATTAAGatgcaatggtaacagcgggattaagatgcgcgccagaaacccctgcggtca > 1:1123727‑M2/1‑25 (MQ=255) | GCAGAAAGCGCCGGCAACTTGTGAAACGATAAAAGGAATAACTTTGCGCTTGTCGAAACAGGCAAACAGCCACAATGCAATGGTAACAGCGGGATTAAGATGCGCGCCGGAAACCCCTGCGGTCAGGTAGATGGCCATTGCCACCCCCAG > REL606/4097276‑4097425 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |