| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2039283 = | 29 (0.530) | 10 (0.190) | 7/142 | 5.2 | 23.1% | coding (412/747 nt) | wbbA | putative glycosyltransferase WbbA |
| ? | REL606 | 2039547 = | 39 (0.760) | coding (148/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
TATATTTTTTAGAAAATGATTATTTGCATGAGTCTAAATGGATTGATGAGATATTTAACTTGGTCAAATCAAATATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2039360‑2039283‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATA > REL606/2039547‑2039596 TATATTTTTTAGAAAATGATTATTTGCATGAGTCTAAATGGATTGATGAGATATTTAACTTGGTCAAATCAAATAT > 1:822101/1‑76TATATTTTTTAGAAAATGATTATTTGCATGAGTCTAAATGGATTGATGAGATATTTAACTTGGTCAAATCAAATAT > 2:1501926/1‑76 TTTTAGAAAATGATTATTTGCATGAGTCTAAATGGATTGATGAGATATTTAACTTGGTCAAATCAAATATAAAAGT < 2:104299/76‑1 GAAAATGATTATTTGCATGAGTCTAAATGGATTGATGAGATATTTAACTTGGTCAAATCAAATATAAAAGTAAATG < 2:1267132/76‑1 AAAATGATTATTTGCATGAGTCTAAATGGATTGATGAGATATTTAACTTGGTCAAATCAAATATAAAAGTAAATGC < 2:1464840/76‑1 AATGATTATTTGCATGAGTCTAAATGGATTGATGAGATATTTAACTTGGTCAAATCAAATATAAAAGTAAATGCTA < 2:1628628/76‑1 ATGAGTCTAAATGGATTGATGAGATATTTAACTTGGTCAAATCAAATATAAAAGTAAATGCTATTTGGTCTTTATA < 2:783653/76‑1 TGAGTCTAAATGGATTGATGAGATATTTAACTTGGTCAAATCAAATATAAAAGTAAATGCTATTTGGTCTTTATAT < 2:1239409/76‑1 ATTTAACTTGGTCAAATCAAATATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATA < 2:497079/76‑1 ATTTAACTTGGTCAAATCAAATATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATA < 2:497096/76‑1 ATTTAACTTGGTCAAATCAAATATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATA < 2:877829/76‑1 ATTTAACTTGGTCAAATCAAAAATAAAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATA < 2:877811/76‑1 TATATTTTTTAGAAAATGATTATTTGCATGAGTCTAAATGGATTGATGAGATATTTAACTTGGTCAAATCAAATATAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2039360‑2039283‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaAAGTAAATGCTATTTGGTCTTTATATTTAGATTCTTTTATTGTATTTATA > REL606/2039547‑2039596 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |