New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | 2039283 = | 29 (0.530) | 10 (0.190) | 7/142 | 5.2 | 23.1% | coding (412/747 nt) | wbbA | putative glycosyltransferase WbbA |
? | REL606 | 2039547 = | 39 (0.760) | coding (148/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
Rejected: Coverage evenness skew score above cutoff. |
TTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAA > REL606/2039208‑2039355 | tttttAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCt > 1:1469636/1‑76 (MQ=255) ttttAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCtt < 2:1367894/76‑1 (MQ=255) tttAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTta < 2:346054/76‑1 (MQ=255) ttAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTtat < 2:897859/76‑1 (MQ=255) tGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATattt < 2:1569179/76‑1 (MQ=255) gATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGAc > 2:692992/1‑76 (MQ=255) gATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGAc > 2:1467176/1‑76 (MQ=255) tCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGt < 1:1614573/76‑1 (MQ=255) acaATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTa < 2:831418/76‑1 (MQ=255) tatTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAata < 1:625376/76‑1 (MQ=255) ttCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATAtc > 1:437885/1‑76 (MQ=255) tCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATAtct > 1:909169/1‑76 (MQ=255) cTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCtcat < 1:623311/76‑1 (MQ=255) cTATATTTATCTAGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCtcat < 1:1163113/76‑1 (MQ=255) atatTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCccatca < 2:1006883/76‑1 (MQ=255) atTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAAt > 1:881644/1‑76 (MQ=255) tttATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATc > 1:143597/1‑76 (MQ=255) tGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCAAttgg < 2:270850/76‑3 (MQ=255) ggATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAg < 1:1348386/76‑1 (MQ=255) tgatCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACt < 2:254788/76‑1 (MQ=255) cATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATg < 1:1600331/76‑1 (MQ=255) aaaGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCaa > 1:1489125/1‑76 (MQ=255) gTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAaataat < 1:1467176/76‑1 (MQ=255) tatCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTc > 1:852488/1‑76 (MQ=255) tatCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTc < 1:333750/76‑1 (MQ=255) tCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTa < 1:938449/76‑1 (MQ=255) cccATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTaa > 1:495321/1‑76 (MQ=255) ccATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTaaa < 2:820201/76‑1 (MQ=255) aTCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTaaaaa < 1:928837/76‑1 (MQ=255) | TTTTTAATGAATCAAGATGTTCACAATATTCACTATATTTATCTGGATGATCATAAAGCGTTGCCATATCCCATCTTATATTTGATTTGACCAAGTTAAATATCTCATCAATCCATTTAGACTCATGCAAATAATCATTTTCTAAAAA > REL606/2039208‑2039355 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |