| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4217526 = | 49 (0.880) | 52 (1.030) | 40/136 | 0.2 | 51.6% | coding (961/2097 nt) | yjbH | predicted porin |
| ? | REL606 | = 4440926 | 53 (1.050) | coding (190/552 nt) | yjgA | hypothetical protein | |||||
Only 100 of 119 total aligned reads displayed.
GCATCTTACCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCAACAATTTCCGCGCCAAGGCGTTTTAG > REL606/4440851‑4441001 | gcaTCTTACCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCcgcgcg > 1:18570/1‑76 (MQ=255)gcaTCTTACCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCcgcgcg < 1:570220/76‑1 (MQ=255) cATCTTACCGATGAGCTGCAACTGGCGGCGGCGGCCTTCCATCCTAATACGCTGGGCGAGATCAATAGCCGCGCGc < 1:817122‑M2/76‑2 (MQ=255) cATCGTACCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGc > 1:221073‑M2/1‑75 (MQ=255) aTCTTACCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGca > 1:781869‑M2/1‑74 (MQ=255) cTTACCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcaga < 2:1357219‑M2/76‑5 (MQ=255) tACCGATGGGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatc > 1:460447‑M2/1‑70 (MQ=255) aCCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatcc < 1:852825‑M2/76‑8 (MQ=255) aCCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatcc > 2:1642025‑M2/1‑69 (MQ=255) aCCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatcc > 2:848695‑M2/1‑69 (MQ=255) aCCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatcc > 2:398775‑M2/1‑69 (MQ=255) aCCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatcc < 2:550663‑M2/76‑8 (MQ=255) aCCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatcc < 2:700393‑M2/76‑8 (MQ=255) cGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccag > 2:1682917‑M2/1‑67 (MQ=255) cGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGc > 2:1476482/1‑76 (MQ=255) tGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcg > 2:1650982‑M2/1‑64 (MQ=255) tGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcg > 2:807848‑M2/1‑64 (MQ=255) gAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcga > 1:1256387‑M2/1‑63 (MQ=255) aGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgga < 1:1067067‑M2/76‑15 (MQ=255) cTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaag > 2:478259‑M2/1‑60 (MQ=255) tGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAACCCCGCCcagacccaggggaaagg < 1:399696‑M2/76‑18 (MQ=255) tGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCAGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACg > 2:1769205/1‑76 (MQ=255) gCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggc < 2:1609068‑M2/76‑19 (MQ=255) gCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTCACgg > 2:719245/1‑76 (MQ=255) cAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcg < 1:1105788‑M2/76‑20 (MQ=255) cAACTGACGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACggg > 1:1393100/1‑76 (MQ=255) cTGGCGGCGGCGGCCTTCCATCTTAATGCGCTGGGCGAGCTCAATAGTCGCGCGcagatccaggcgaaaggcgata > 1:1542823‑M2/1‑54 (MQ=255) cTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATCGGCGGGCGcagatacaggggaaaagcgata < 2:1109361‑M2/76‑23 (MQ=255) tGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCTAGCTCAATAGCCGCGCGcagctgcaggcgaaaggccatat < 2:1444187‑M2/76‑24 (MQ=255) ggcggcggcGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacg < 2:909387‑M2/76‑25 (MQ=255) ggcggcggcGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacg < 2:1695196‑M2/76‑25 (MQ=255) ggcggcggcGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGGTCtt > 2:1790245/1‑76 (MQ=255) ggcggcggcGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCtt < 1:1600218/76‑1 (MQ=255) ggcggcggcGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCtt > 2:235424/1‑76 (MQ=255) cggcggcgACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgct > 2:895941‑M2/1‑50 (MQ=255) gcggcgACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATACGCATCTAACGGGATCTTATcc > 1:1496311/1‑76 (MQ=255) cggcgACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgta > 2:832562‑M2/1‑47 (MQ=255) ggcgACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtat < 1:955523‑M2/76‑31 (MQ=255) gcgACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatg < 2:1632825‑M2/76‑32 (MQ=255) gcgACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAgc > 1:553454/1‑76 (MQ=255) cgACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAgcg > 1:1171547/1‑76 (MQ=255) cgACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAgcg > 1:1132624/1‑76 (MQ=255) aCCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGcgcg < 1:871923/76‑1 (MQ=255) aCCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGcgcg < 1:1613764/76‑1 (MQ=255) cTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttacc > 2:1400765‑M2/1‑40 (MQ=255) ttCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGttt > 1:284305/1‑76 (MQ=255) tCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccgg < 1:1509692‑M2/76‑39 (MQ=255) tCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccgg < 1:1299301‑M2/76‑39 (MQ=255) ccATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGttttt < 2:857415/76‑1 (MQ=255) ccATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGtcttt > 1:714943/1‑76 (MQ=255) cATCTTAATACGCTGGGCGCGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcg > 2:1551346‑M2/1‑36 (MQ=255) cATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcg > 1:58967‑M2/1‑36 (MQ=255) cATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcg < 1:156349‑M2/76‑41 (MQ=255) cATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTc < 1:1070800/76‑1 (MQ=255) cATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGATTTTc > 2:948899/1‑76 (MQ=255) cATCTTAATACGCTGGGCGAGCACAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTc > 1:461570/1‑76 (MQ=255) aTCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcga < 2:1481523‑M2/76‑42 (MQ=255) ctgaaTACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTcccc < 1:1768704/73‑1 (MQ=255) ttAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCa < 1:153695/76‑1 (MQ=255) tgaaTACGCCGGGCGAGCTCAATAGCCGCCAGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCa < 2:718762/74‑1 (MQ=255) tAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcag > 2:1172961‑M2/1‑31 (MQ=255) tAATACGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcag < 2:1421057‑M2/76‑46 (MQ=255) tAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAg < 1:117551/76‑1 (MQ=255) tAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTCTTTCCCCAg > 1:74752/1‑76 (MQ=255) aCGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtga < 1:902324‑M2/76‑50 (MQ=255) aCGCTGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtga > 1:379642‑M2/1‑27 (MQ=255) aCGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATca < 2:483346/76‑1 (MQ=255) aCGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATca > 2:416494/1‑76 (MQ=255) cGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATcaa < 1:1591968/76‑1 (MQ=255) gCGGGGCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaa > 1:1085039‑M2/1‑25 (MQ=255) cTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATcaaca < 1:939439/76‑1 (MQ=255) gggCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaattt < 2:1337779‑M2/76‑55 (MQ=255) gggCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaatat < 2:282828‑M2/76‑55 (MQ=255) gggCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaatat < 2:296665‑M2/76‑55 (MQ=255) gggCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaatat < 2:1646718‑M2/76‑55 (MQ=255) gggCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggcgaaagag < 2:1134178‑M2/76‑55 (MQ=255) gggCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggaggaatat < 2:383390‑M2/76‑55 (MQ=255) gggCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCAACAAt > 2:22980/1‑76 (MQ=255) gggCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCAACAAt < 1:609042/76‑1 (MQ=255) gggCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCAACAAt > 2:22979/1‑76 (MQ=255) ggCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaatatc > 1:137601‑M2/1‑21 (MQ=255) gCGAGCTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaatatcg > 1:1008501‑M2/1‑20 (MQ=255) gAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCCGATCAACAATTTcc > 2:906936/1‑76 (MQ=255) aGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCAACAATTTCcg < 1:815316/76‑1 (MQ=255) gCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCACCAATCTCcgc > 2:1195059/1‑76 (MQ=255) cTCAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaatatcgtgatt > 2:338331‑M2/1‑15 (MQ=255) cAATAGCCGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaatatcgtgattcg < 2:1365043‑M2/76‑64 (MQ=255) aGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCAACAATTTCCGCGCCAAgg > 2:800833/1‑76 (MQ=255) gCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCAACAATTTCCGCGCCAAGGc < 2:1575570/76‑1 (MQ=255) ccGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaatatcgtgattcgcgcgaa > 1:1729657‑M2/1‑7 (MQ=255) ccGCGCGcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaatatcgtgattcgcgcgaa > 2:1183760‑M2/1‑7 (MQ=255) ccGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCAACAATTTCCGCGCCAAGGCg < 1:1381803/76‑1 (MQ=255) cgcgcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaatatcgtgattcgcgcgaaggg > 1:129879‑M2/1‑4 (MQ=255) cgcgcAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCAACAATTTCCGCGCCAAGGCGttt > 1:951546/1‑76 (MQ=255) gcgcAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCAACAATTTCCGCGCCAAGGCGtttt < 2:562363/76‑1 (MQ=255) gcgcAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTCTCCCCAGATCAACAATTTCCGCGCCAAGGCGtttt < 2:1505960/76‑1 (MQ=255) gcgcAGATCCGCATCTAACGGGATCTTATCCAGCGCG‑TTTTCCCCAGATCAACAATTTCCGCGCCAAGGCGTTTTa < 2:944238/76‑1 (MQ=255) gcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaatatcgtgattcgcgcgaagggatc > 1:614049‑M2/1‑1 (MQ=255) gcagatccaggcgaaaggcgatacgctgtatgttaccggcgagcaggtgaaatatcgtgattcgcgcgaagggatc > 1:357942‑M2/1‑1 (MQ=255) gcAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCAACAATTTCCGCGCCACGGCGTTTTac > 2:1686241/1‑75 (MQ=255) | GCATCTTACCGATGAGCTGCAACTGGCGGCGGCGACCTTCCATCTTAATACGCTGGGCGAGCTCAATAGCCGCGCGCAGATCCGCATCTAACGGGATCTTATCCAGCGCGTTTTTCCCCAGATCAACAATTTCCGCGCCAAGGCGTTTTAG > REL606/4440851‑4441001 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |