| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 294,446 | IS1 (+) +9 bp | coding (190‑198/720 nt) | ykgE → | predicted oxidoreductase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 262792 = | NA (NA) | 28 (1.280) | 21/148 | 0.2 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | = 294454 | 0 (0.000) | coding (198/720 nt) | ykgE | predicted oxidoreductase | |||||
| * | ? | REL606 | = 263559 | NA (NA) | 22 (1.010) | 19/148 | 0.3 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | REL606 | 294446 = | 0 (0.000) | coding (190/720 nt) | ykgE | predicted oxidoreductase | |||||
GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/262867‑262792‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAGTGCGGCGATCAGATTTTTCATCCCTGGAATCGCTTCTTTGATATAACCGCTATTGATCGCAGGCTGACC < REL606/294454‑294383 cCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:146050/75‑1GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCATCATCACC < 1:448356/76‑1GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:60959/76‑1GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC > 1:344450/1‑76GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:351078/76‑1GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC < 1:366428/76‑1 CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 1:134983/76‑1 CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC < 2:526372/76‑1 CTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC > 2:4048/1‑76 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCA < 1:647909/76‑1 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCA < 2:227981/76‑1 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCA > 2:298990/1‑76 TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCA < 2:309484/76‑1 TAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTG > 2:391938/1‑76 AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTGC > 1:428622/1‑76 AAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTGCGG > 2:71929/1‑76 AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTGCGGCGATCA < 1:502946/76‑1 CCACTGGAGCACCTCAAAAACTCCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTGCGGCGATCAGAT < 2:186/76‑1 CTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTGCGGCGATCAGATTTT < 2:388674/76‑1 GCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTGCGGCGATCAGATTTTTCATC < 1:27451/76‑1 CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTGCGGCGATCAGATTTTTCATCCCT > 1:62564/1‑76 TCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTGCGGCGATCAGATTTTTCATCCCTGG > 1:172629/1‑76 AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTGCGGCGATCAGATTTTTCATCCCTGGAAT > 1:104485/1‑76 CATCATACACTAAATCAGTAAGTTGGCAGCATCACCCAGTGCGGCGATCAGATTTTTCATCCCTGGAATCGCTTCT > 1:498701/1‑76 TAAATCAGTAAGTTGGCAGCATCACCCAGTGCGGCGATCAGATTTTTCATCCCTGGAATCGCTTCTTTGATATAAC < 1:182979/76‑1 ATCAGTAAGTTGGCAGCATCACCCAGTGCGGCGATCAGATTTTTCATCCCTGGAATCGCTTCTTTGATATAACCGC > 2:144988/1‑76 AGTAAGTTGGCAGCATCACCCAGTGCGGCGATCAGATTTTTCATCCCCGGAATCGCTTCTTTGATATAACCGCTAT < 2:689470/76‑1 GTAAGTTGGCAGCATCACCCAGTGCGGCGATCAGATTTTTCATCCCTGGAATCGCTTCTTTGATATAACCGCTATT > 1:365646/1‑76 TAAGTTGGCAGCATCACCCAGTGCGGCGATCAGATTTTTCATCCCTGGAATCGCTTCTTTGATATAACCGCTATTG > 2:89835/1‑76 AAGTTGGCAGCATCACCCAGTGCGGCGATCAGATTTTTCATCCCTGGAATCGCTTCTTTGATATAACCGCTATTGA > 2:225942/1‑76 CAGCATCACCCAGTGCGGCGATCAGATTTTTCATCCCTGGAATCGCTTCTTTGATATAACCGCTATTGATCGCAGG < 2:629238/76‑1 GCATCACCCAGTGCGGCGATCAGATTTTTCATCCCTGGAATCGCTTCTTTGATATAACCGCTATTGATCGCAGGCT < 2:327806/76‑1 CATCACCCAGTGCGGCGATCAGATTTTTCATCCCTGGAATCGCTTCTTTGATATAACCGCTATTGATCGCAGGCTG > 2:16115/1‑76 CACCCAGTGCGGCGATCAGATTTTTCATCCCTGGAATCGCTTCTTTGATATAACCGCTATTGATCGCAGGCTGACC < 2:563337/76‑1 GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/262867‑262792‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAGTGCGGCGATCAGATTTTTCATCCCTGGAATCGCTTCTTTGATATAACCGCTATTGATCGCAGGCTGACC < REL606/294454‑294383 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |