| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 294,446 | IS1 (+) +9 bp | coding (190‑198/720 nt) | ykgE → | predicted oxidoreductase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 262792 = | NA (NA) | 28 (1.280) | 21/148 | 0.2 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | = 294454 | 0 (0.000) | coding (198/720 nt) | ykgE | predicted oxidoreductase | |||||
| * | ? | REL606 | = 263559 | NA (NA) | 22 (1.010) | 19/148 | 0.3 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | REL606 | 294446 = | 0 (0.000) | coding (190/720 nt) | ykgE | predicted oxidoreductase | |||||
TGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTTGCACCTATGCCGTAAAAAGTTACCCGACGTATCTG > REL606/294380‑294529 | ctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGCACTgg < 1:394963‑M2/10‑1 (MQ=255) ggTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGggtg < 2:563337‑M2/76‑5 (MQ=255) tgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGCACTGGAGGAt > 2:530108‑M2/62‑76 (MQ=255) cAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGggtgatg > 2:16115‑M2/1‑69 (MQ=255) aGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGggtgatgc < 2:327806‑M2/76‑9 (MQ=255) caaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGCACTGGAGGATAac > 2:675337‑M2/59‑76 (MQ=255) ccTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGggtgatgctg < 2:629238‑M2/76‑11 (MQ=255) aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGCACTGGAGGATAacg < 1:77747‑M2/19‑1 (MQ=255) agtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGCACTGGAGGATAacgac > 1:185868‑M2/56‑76 (MQ=255) gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccGCCGCACTGGAGGATAacgacg < 1:69148‑M2/22‑1 (MQ=255) tCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGggtgatgctgccaactt > 2:225942‑M2/1‑59 (MQ=255) cgggcattatctgaacacaaaacactatcaataagttggagtcattaccGCCGCACTGGAGGATAACGACATTccc > 2:709896‑M2/50‑76 (MQ=255) cAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGggtgatgctgccaactta > 2:89835‑M2/1‑58 (MQ=255) aaTAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGggtgatgctgccaacttac > 1:365646‑M2/1‑57 (MQ=255) aTAGCGGTTATATCAAAGAAGCGATTCCGGGGATGAAAAATCTGATCGCCGCACTGggtgatgctgccaacttact < 2:689470‑M2/76‑21 (MQ=255) cattatctgaacataaaacactatcaataagtgggagtcattaccGCCGCACTGGAGGATAACGACGATCCCatta < 1:525763‑M2/31‑1 (MQ=255) gCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGggtgatgctgccaacttactgat > 2:144988‑M2/1‑53 (MQ=255) ttatctgaacataaaacactatcaataagttggagtcattaccGCCGCACTGGAGGATAACGACGATCCCattatt < 2:686150‑M2/33‑1 (MQ=255) gTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGggtgatgctgccaacttactgattta < 1:182979‑M2/76‑27 (MQ=255) gaacataaaacactatcaataagttggagtcattaccGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCg < 2:665838‑M2/39‑1 (MQ=255) aataaaacactatcaaaaagttggagtcattaccGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCggct < 1:127211‑M2/42‑1 (MQ=255) ataaaacactatcaataagtgggagtcattgccGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCggctg < 2:587129‑M2/43‑1 (MQ=255) aaaaaccctatcaaaaagttggagtcattaccGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCggctgg < 1:145284‑M2/44‑1 (MQ=255) agaagCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGggtgatgctgccaacttactgatttagtgtatgatg > 1:498701‑M2/1‑40 (MQ=255) aaaacactatcaataagttggagtcattaccGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCggctggc > 1:524694‑M2/32‑76 (MQ=255) cactgtcaataagtgggagtcatttccGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCtt < 2:544004‑M2/49‑1 (MQ=255) ctatcaataagttggagtcattaccGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTTGc > 1:644186‑M2/26‑76 (MQ=255) tatcaataagttggagtcattaccGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTTGCa < 1:436104‑M2/52‑1 (MQ=255) aTTCCAGGGATGAAAAATCTGATCGCCGCACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttt > 1:104485‑M2/1‑33 (MQ=255) ccAGGGATGAAAAATCTGATCGCCGCACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttga > 1:172629‑M2/1‑30 (MQ=255) aGGGATGAAAAATCTGATCGCCGCACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg > 1:62564‑M2/1‑28 (MQ=255) gATGAAAAATCTGATCGCCGCACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc < 1:27451‑M2/76‑52 (MQ=255) aaaaTCTGATCGCCGCACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccag < 2:388674‑M2/76‑57 (MQ=255) aTCTGATCGCCGCACTGggtgatgctgccaacttactgatttagtgtatgatggagtttttgaggtgctccagtgg < 2:186‑M2/76‑60 (MQ=255) ttaccGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTTGCACCTATGCCGTAAAAAGTTa > 2:413439‑M2/6‑76 (MQ=255) tGATCGCCGCACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt < 1:502946‑M2/76‑63 (MQ=255) ccgcACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt > 2:71929‑M2/1‑8 (MQ=255) gcACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct > 1:428622‑M2/1‑6 (MQ=255) cACTGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttcta > 2:391938‑M2/1‑5 (MQ=255) tGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca < 1:647909‑M2/76‑75 (MQ=255) tGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca < 2:227981‑M2/76‑75 (MQ=255) tGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca > 2:298990‑M2/1‑2 (MQ=255) tGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca < 2:309484‑M2/76‑75 (MQ=255) gggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag < 1:134983‑M2/76‑76 (MQ=255) gggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag < 2:526372‑M2/76‑76 (MQ=255) gggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag > 2:4048‑M2/1‑1 (MQ=255) | TGCGGTCAGCCTGCGATCAATAGCGGTTATATCAAAGAAGCGATTCCAGGGATGAAAAATCTGATCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTTGCACCTATGCCGTAAAAAGTTACCCGACGTATCTG > REL606/294380‑294529 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |