| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 294,446 | IS1 (+) +9 bp | coding (190‑198/720 nt) | ykgE → | predicted oxidoreductase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 262792 = | NA (NA) | 28 (1.280) | 21/148 | 0.2 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | REL606 | = 294454 | 0 (0.000) | coding (198/720 nt) | ykgE | predicted oxidoreductase | |||||
| * | ? | REL606 | = 263559 | NA (NA) | 22 (1.010) | 19/148 | 0.3 | 100% | noncoding (768/768 nt) | IS1 | repeat region |
| ? | REL606 | 294446 = | 0 (0.000) | coding (190/720 nt) | ykgE | predicted oxidoreductase | |||||
ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/263484‑263559‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTTGCACCTATGCCGTAAAAAGTTA > REL606/294446‑294516 ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC > 2:705544/1‑76ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC > 1:407964/1‑76ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 2:351445/76‑1ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC < 1:76329/76‑1 TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG > 1:25505/1‑76 TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCG < 1:257783/76‑1 GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCC > 2:644214/1‑76 GTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCG > 1:334770/1‑76 CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCGCACTGG < 1:394963/76‑1 TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCGCACTGGAGGAT > 2:530108/1‑76 CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCGCACTGGAGGATAAC > 2:675337/1‑76 AAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCGCACTGGAGGATAACG < 1:77747/76‑1 AGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCGCACTGGAGGATAACGAC > 1:185868/1‑76 GTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCGCACTGGAGGATAACGACG < 1:69148/76‑1 CGGGCATTATCTGAACACAAAACACTATCAATAAGTTGGAGTCATTACCGCCGCACTGGAGGATAACGACATTCCC > 2:709896/1‑76 CATTATCTGAACATAAAACACTATCAATAAGTGGGAGTCATTACCGCCGCACTGGAGGATAACGACGATCCCATTA < 1:525763/76‑1 TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCGCACTGGAGGATAACGACGATCCCATTATT < 2:686150/76‑1 GAACATAAAACACTATCAATAAGTTGGAGTCATTACCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCG < 2:665838/76‑1 aATAAAACACTATCAAAAAGTTGGAGTCATTACCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCT < 1:127211/75‑1 ATAAAACACTATCAATAAGTGGGAGTCATTGCCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTG < 2:587129/76‑1 aAAAACCCTATCAAAAAGTTGGAGTCATTACCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGG < 1:145284/75‑1 AAAACACTATCAATAAGTTGGAGTCATTACCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGC > 1:524694/1‑76 CACTGTCAATAAGTGGGAGTCATTTCCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTT < 2:544004/76‑1 CTATCAATAAGTTGGAGTCATTACCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTTGC > 1:644186/1‑76 TATCAATAAGTTGGAGTCATTACCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTTGCA < 1:436104/76‑1 TTACCGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTTGCACCTATGCCGTAAAAAGTTA > 2:413439/1‑76 ATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/263484‑263559‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cGCCGCACTGGAGGATAACGACGATCCCATTATTTCACCGGCTGGCTCTTGCACCTATGCCGTAAAAAGTTA > REL606/294446‑294516 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |