New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 128708411 (0.160)40 (0.700) 22/176 1.3 59.7% noncoding (153/171 nt) rttR rtT sRNA, processed from tyrT transcript
?NC_000913 1287557 = 45 (0.780)noncoding (66/85 nt) tyrT tRNA‑Tyr

Only 100 of 113 total aligned reads displayed.

CGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGC  >  NC_000913/1287427‑1287691
                                                                                                                                  |                                                                                                                                      
cGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTc                                                                                                                                >  1:90959/1‑139 (MQ=255)
    ctctcGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAg                                                                                                                            <  2:638014/139‑1 (MQ=255)
      ctcGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTc                                                                                                                          >  1:123986/1‑139 (MQ=255)
              cgagccgaaccttaatcgaagcttctcatccttccccgcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtggggggaaggattCGAACCTTCGAAGTCGATGACgg                                                                                                                  <  1:375049‑M2/23‑1 (MQ=255)
              cGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACgg                                                                                                                  <  1:126502/139‑1 (MQ=255)
               cgagccgaaccttaatcgaagcttctcatccttccccgcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGc                                                                                                                 <  2:399570‑M2/24‑1 (MQ=255)
               cgagccgaaccttaatcgaagcttctcatccttccccgcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGc                                                                                                                 <  2:828817‑M2/24‑1 (MQ=255)
                cTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCa                                                                                                                <  1:1532333/139‑1 (MQ=255)
                                    aaGGTTCTTACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCtt                                                                                            >  2:1501804/1‑139 (MQ=255)
                                      ggTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTg                                                                                          >  2:370952/1‑139 (MQ=255)
                                       ctcatccttccccgcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTgg                                                                                         >  2:453566‑M2/92‑139 (MQ=255)
                                        tcatccttccccgcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGc                                                                                        >  2:824569‑M2/91‑139 (MQ=255)
                                             cttccccgcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTc                                                                                   <  1:824569‑M2/54‑1 (MQ=255)
                                              tccccgcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtggggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCg                                                                                  <  1:430611‑M2/55‑1 (MQ=255)
                                               tccccgcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTg                                                                                                   <  1:490855‑M2/38‑1 (MQ=255)
                                               tccccgcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTg                                                                                                   >  2:490855‑M2/84‑121 (MQ=255)
                                               tccccgcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCgg                                                                                 >  1:963475‑M2/84‑139 (MQ=255)
                                                ccccgcatgggcagaatatttgattgcggattcgcttgagaggtcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCggg                                                                                <  2:550541‑M2/57‑1 (MQ=255)
                                                 ttCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGa                                                                               >  1:1592543/1‑139 (MQ=255)
                                                 cccgcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGAc                                                                                                                    <  1:401440‑M2/21‑1 (MQ=255)
                                                  tCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGaa                                                                              >  2:351386/1‑139 (MQ=255)
                                                  ccgcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGaa                                                                              >  2:673582‑M2/81‑139 (MQ=255)
                                                   ccccGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                                             >  2:1218715/1‑139 (MQ=255)
                                                    gcatgggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAcc                                                                            <  2:586160‑M2/61‑1 (MQ=255)
                                                     ccGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAccc                                                                           <  2:90959/139‑1 (MQ=255)
                                                       aatccgcaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCcca                                                                         >  2:543924‑M2/76‑139 (MQ=255)
                                                        gggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCccac                                                                        >  2:631744‑M2/75‑139 (MQ=255)
                                                         tGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCg                                                                                                                               <  2:1245452/83‑1 (MQ=255)
                                                         ggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTg                                                                                                   <  2:1199664‑M2/38‑1 (MQ=255)
                                                         ggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTg                                                                                                   >  1:1199664‑M2/74‑111 (MQ=255)
                                                         ggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTg                                                                                                   <  2:1653504‑M2/38‑1 (MQ=255)
                                                         ggcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTg                                                                                                   >  1:1653504‑M2/74‑111 (MQ=255)
                                                          gcagaatatttgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCccacca                                                                      >  2:143851‑M2/73‑139 (MQ=255)
                                                           aGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCt                                                                                                                                  <  1:361754/78‑1 (MQ=255)
                                                           aGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCt                                                                                                                                  >  2:361754/1‑78 (MQ=255)
                                                            gTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACg                                                                    <  2:1592543/139‑1 (MQ=255)
                                                             tGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACgg                                                                                                                  <  2:84382/92‑1 (MQ=255)
                                                             tGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTg                                                                                                   <  2:485488/107‑1 (MQ=255)
                                                             tGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACgg                                                                   >  1:1534826/1‑139 (MQ=255)
                                                               cAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACgggg                                                                 >  1:1204729/1‑139 (MQ=255)
                                                                    tgattgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCAGGGGTaattc                                                           >  2:509188‑M2/63‑137 (MQ=255)
                                                                        tgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                                             >  2:1287093‑M2/59‑118 (MQ=255)
                                                                        tgcggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                                             <  1:1287093‑M2/60‑1 (MQ=255)
                                                                          cggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACgg                                                                                                                  <  2:891884‑M2/23‑1 (MQ=255)
                                                                          cggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACgg                                                                                                                  >  1:891884‑M2/57‑79 (MQ=255)
                                                                           ggattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACcaggggtaattcaaatttt                                                    >  2:1636617‑M2/56‑130 (MQ=255)
                                                                            tctcACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATCCTTTTTAc                                                    >  1:983449/1‑139 (MQ=255)
                                                                            gattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                                             <  2:1381509‑M2/60‑1 (MQ=255)
                                                                            gattcgcttgagagttcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                                             >  1:1381509‑M2/55‑114 (MQ=255)
                                                                              tcACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTg                                                  >  2:1256051/1‑139 (MQ=255)
                                                                                      gTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTc                                          >  2:1500994/1‑139 (MQ=255)
                                                                                           tcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCg                                                                                                                               >  1:123768‑M2/40‑49 (MQ=255)
                                                                                           tcagggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCg                                                                                                                               <  2:123768‑M2/10‑1 (MQ=255)
                                                                                             agggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                                             <  2:1191414‑M2/60‑1 (MQ=255)
                                                                                             agggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                                             >  1:1191414‑M2/38‑97 (MQ=255)
                                                                                               tCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGt                                                                                                      >  2:1534295/1‑70 (MQ=255)
                                                                                               tCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGt                                                                                                      <  1:1534295/70‑1 (MQ=255)
                                                                                               tCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAccc                                                                           <  2:378720/97‑1 (MQ=255)
                                                                                               tCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAccc                                                                           >  1:378720/1‑97 (MQ=255)
                                                                                               tCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCccacca                                                                      >  1:248724/1‑102 (MQ=255)
                                                                                               tCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGAAACCccacca                                                                      <  2:248724/102‑1 (MQ=255)
                                                                                               ggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGa                                                                                                                     >  2:448095‑M2/36‑55 (MQ=255)
                                                                                               ggacttttgaaagtgatggtggtgggggaaggattCGAACCTTCGAAGTCGATGa                                                                                                                     <  1:448095‑M2/20‑1 (MQ=255)
                                                                                                cGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGAc                                                                                                                    >  1:830198/1‑55 (MQ=255)
                                                                                                cGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGAc                                                                                                                    <  2:299218/55‑1 (MQ=255)
                                                                                                cGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGAc                                                                                                                    >  1:299218/1‑55 (MQ=255)
                                                                                                 gCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAcc                                                                            <  2:1328518/94‑1 (MQ=255)
                                                                                                 gCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAcc                                                                            >  1:1328518/1‑94 (MQ=255)
                                                                                                   tgtgGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAg                             <  2:1204729/139‑1 (MQ=255)
                                                                                                     tggtgAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTa                                                                                                          >  1:279095/1‑60 (MQ=255)
                                                                                                        tgAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCgggg                        <  1:1218715/139‑1 (MQ=255)
                                                                                                          aaTTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGTCTGCTCCCTTATCGGGAAGCGGGgcg                      >  2:1228014/1‑139 (MQ=255)
                                                                                                             gatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                                             >  2:961769‑M2/22‑81 (MQ=255)
                                                                                                             gatggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                                             <  1:961769‑M2/60‑1 (MQ=255)
                                                                                                              atggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                                             >  1:1213366‑M2/21‑80 (MQ=255)
                                                                                                              atggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAc                                                                             <  2:1213366‑M2/60‑1 (MQ=255)
                                                                                                               tggtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGcatca                 >  2:223308‑M2/20‑139 (MQ=255)
                                                                                                                 gtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCa                                                                                                                >  1:777539‑M2/18‑42 (MQ=255)
                                                                                                                 gtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCa                                                                                                                <  2:777539‑M2/25‑1 (MQ=255)
                                                                                                                 gtggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCata               >  2:897114‑M2/18‑139 (MQ=255)
                                                                                                                  tggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGt                                                                                                      >  1:91803‑M2/17‑51 (MQ=255)
                                                                                                                  tggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGt                                                                                                      <  2:91803‑M2/35‑1 (MQ=255)
                                                                                                                  tggtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCatat              >  1:614531‑M2/17‑139 (MQ=255)
                                                                                                                    gtgggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCa            >  1:234750‑M2/15‑139 (MQ=255)
                                                                                                                      gggggaaggattCGAACCTTCGAAGTCGATGACGGCa                                                                                                                >  2:1570145‑M2/13‑37 (MQ=255)
                                                                                                                      gggggaaggattCGAACCTTCGAAGTCGATGACGGCa                                                                                                                <  1:1570145‑M2/25‑1 (MQ=255)
                                                                                                                       ggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTaa                                                              <  1:967921‑M2/75‑1 (MQ=255)
                                                                                                                       ggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTaa                                                              >  2:33155‑M2/12‑86 (MQ=255)
                                                                                                                       ggggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTaa                                                              <  1:33155‑M2/75‑1 (MQ=255)
                                                                                                                         ggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCgggg                        <  1:199933‑M2/113‑1 (MQ=255)
                                                                                                                         ggaaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCgggg                        >  2:199933‑M2/10‑122 (MQ=255)
                                                                                                                           aaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAcc                                                                            <  2:886143‑M2/61‑1 (MQ=255)
                                                                                                                           aaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAAcc                                                                            >  1:886143‑M2/8‑68 (MQ=255)
                                                                                                                           aaggattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGTCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGAcg     <  1:1228014‑M2/132‑1 (MQ=255)
                                                                                                                            aggattCGAACCTTCGAAGTCGATGACGGCAGATTCACAGTCTGCTCCCTTTGGCCGCTCGGGAAcc                                                                            <  2:663757‑M2/61‑1 (MQ=255)
                                                                                                                            aggattCGAACCTTCGAAGTCGATGACGGCAGATTCACAGTCTGCTCCCTTTGGCCGCTCGGGAAcc                                                                            >  1:663757‑M2/7‑67 (MQ=255)
                                                                                                                              gattCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACgcgc  <  1:370952‑M2/135‑1 (MQ=255)
                                                                                                                                 tCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCggg                                                                                >  1:602062‑M2/2‑58 (MQ=255)
                                                                                                                                 tCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCggg                                                                                <  2:602062‑M2/57‑1 (MQ=255)
                                                                                                                                 tCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGaa                                                                              <  1:594014‑M2/59‑1 (MQ=255)
                                                                                                                                  |                                                                                                                                      
CGTTCTCTCGCTTTCGCTCGAATCGAACCTTAGTCGAAGGTTCTCACCCTTCCCCGATGAGTGCAAACTTTCACAATCTCACCGAAGTTACCACATCGCTGTGGTGAATTATGGTGGTGGGGGAAGGATTCGAACCTTCGAAGTCGATGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCACGGGGTAATGCTTTTTACTGGCCTGCTCCCTTATCGGGAAGCGGGGCGCATCATATCAAATGACGCGC  >  NC_000913/1287427‑1287691

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.