mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 120 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_007779 | = 4635543 | 206 (1.150) | 7 (0.040) | 5/394 | NT | 3.8% | coding (131/1938 nt) | sltY | murein transglycosylase |
| ? | NC_007779 | = 4636001 | 154 (0.890) | coding (589/1938 nt) | sltY | murein transglycosylase | |||||
| * | ? | NC_007779 | 4473427 = | 154 (0.860) | 5 (0.030) | 4/402 | NT | 2.8% | coding (1123/2697 nt) | mgtA | magnesium‑translocating P‑type ATPase |
| ? | NC_007779 | 4473666 = | 200 (1.140) | coding (1362/2697 nt) | mgtA | magnesium‑translocating P‑type ATPase | |||||
| * | ? | NC_007779 | = 4470814 | 203 (1.130) | 5 (0.030) | 4/402 | NT | 2.5% | coding (47/1422 nt) | treB | PTS trehalose transporter subunit IIBC |
| ? | NC_007779 | = 4470885 | 189 (1.080) | intergenic (‑25/+94) | treB/treR | PTS trehalose transporter subunit IIBC/trehalose operon repressor | |||||
| * | ? | NC_007779 | = 4210626 | 124 (0.690) | 4 (0.020) | 4/392 | NT | 2.7% | coding (234/258 nt) coding (555/555 nt) |
Y75_RS20875 Y75_RS20880 |
DUF1488 domain‑containing protein gamma carbonic anhydrase family protein |
| ? | NC_007779 | = 4210817 | 167 (0.980) | coding (364/555 nt) | Y75_RS20880 | gamma carbonic anhydrase family protein | |||||
| * | ? | NC_007779 | 4136935 = | 222 (1.240) | 5 (0.030) | 3/396 | NT | 2.2% | coding (315/786 nt) | frlD | fructoselysine 6‑kinase |
| ? | NC_007779 | 4137013 = | 227 (1.310) | coding (237/786 nt) | frlD | fructoselysine 6‑kinase | |||||
| * | ? | NC_007779 | 4132197 = | 292 (1.630) | 9 (0.050) | 3/392 | NT | 3.4% | coding (372/879 nt) | Y75_RS20375 | phosphotriesterase‑related protein |
| ? | NC_007779 | 4132294 = | 232 (1.350) | coding (469/879 nt) | Y75_RS20375 | phosphotriesterase‑related protein | |||||
| * | ? | NC_007779 | 4100082 = | 258 (1.440) | 6 (0.030) | 4/400 | NT | 2.5% | coding (172/228 nt) | feoA | ferrous iron transporter A |
| ? | NC_007779 | 4100155 = | 223 (1.280) | coding (99/228 nt) | feoA | ferrous iron transporter A | |||||
| * | ? | NC_007779 | = 4092425 | 200 (1.120) | 6 (0.040) | 6/386 | NT | 3.1% | coding (2080/2085 nt) | malQ | 4‑alpha‑glucanotransferase |
| ? | NC_007779 | = 4093204 | 188 (1.110) | coding (654/1317 nt) | gntT | gluconate transporter | |||||
| * | ? | NC_007779 | = 4077000 | 184 (1.030) | 9 (0.050) | 6/396 | NT | 4.8% | coding (1403/1506 nt) | glpD | glycerol‑3‑phosphate dehydrogenase |
| ? | NC_007779 | = 4077004 | 179 (1.030) | coding (1399/1506 nt) | glpD | glycerol‑3‑phosphate dehydrogenase | |||||
| * | ? | NC_007779 | = 4069140 | 198 (1.110) | 3 (0.020) | 3/392 | NT | 1.7% | coding (45/1974 nt) | glgX | glycogen debranching protein GlgX |
| ? | NC_007779 | = 4069282 | 155 (0.910) | coding (187/1974 nt) | glgX | glycogen debranching protein GlgX | |||||