mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 29 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4522438 | 136 (1.000) | 3 (0.020) | 3/552 | NT | 2.2% | coding (1657/1968 nt) | yjhG | putative dehydratase |
| ? | NC_000913 | = 4522443 | 134 (1.000) | coding (1652/1968 nt) | yjhG | putative dehydratase | |||||
| * | ? | NC_000913 | = 4512503 | 130 (0.950) | 3 (0.020) | 3/552 | NT | 2.4% | coding (907/999 nt) | fecC | ferric citrate ABC transporter permease |
| ? | NC_000913 | = 4512569 | 119 (0.890) | coding (841/999 nt) | fecC | ferric citrate ABC transporter permease | |||||
| * | ? | NC_000913 | 4018385 = | 104 (0.760) | 4 (0.030) | 4/556 | NT | 3.6% | coding (1053/1428 nt) | rmuC | DNA recombination protein |
| ? | NC_000913 | 4018461 = | 110 (0.820) | coding (1129/1428 nt) | rmuC | DNA recombination protein | |||||
| * | ? | NC_000913 | 4012905 = | 130 (0.950) | 3 (0.020) | 3/550 | NT | 2.3% | intergenic (‑89/‑148) | metR/metE | methionine biosynthesis regulon transcriptional regulator/5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase |
| ? | NC_000913 | 4013030 = | 128 (0.960) | intergenic (‑214/‑23) | metR/metE | methionine biosynthesis regulon transcriptional regulator/5‑methyltetrahydropteroyltriglutamate‑ homocysteine S‑methyltransferase | |||||
| * | ? | NC_000913 | = 3847645 | 88 (0.640) | 3 (0.020) | 3/554 | NT | 3.0% | coding (980/1320 nt) | uhpC | membrane protein regulates uhpT expression |
| ? | NC_000913 | = 3847826 | 107 (0.800) | coding (799/1320 nt) | uhpC | membrane protein regulates uhpT expression | |||||
| * | ? | NC_000913 | = 3828991 | 771 (5.640) | 8 (0.060) | 7/528 | NT | 1.1% | coding (47/1392 nt) | xanP | xanthine permease |
| ? | NC_000913 | = 3828973 | 723 (5.650) | coding (29/1392 nt) | xanP | xanthine permease | |||||
| * | ? | NC_000913 | = 3823750 | 742 (5.430) | 3 (0.020) | 7/552 | NT | 0.41% | coding (1351/2109 nt) | spoT | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase |
| ? | NC_000913 | = 3823752 | 729 (5.450) | coding (1353/2109 nt) | spoT | bifunctional (p)ppGpp synthetase II/ guanosine‑3',5'‑bis pyrophosphate 3'‑pyrophosphohydrolase | |||||
| * | ? | NC_000913 | 3813393 = | 658 (4.810) | 3 (0.020) | 3/546 | NT | 0.47% | coding (663/1221 nt) | dfp | fused 4'‑phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase, FMN‑binding |
| ? | NC_000913 | = 3813389 | 640 (4.840) | coding (659/1221 nt) | dfp | fused 4'‑phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase, FMN‑binding | |||||
| * | ? | NC_000913 | 3787895 = | 639 (4.680) | 3 (0.020) | 3/544 | NT | 0.49% | coding (1058/1260 nt) | envC | activator of AmiB,C murein hydrolases, septal ring factor |
| ? | NC_000913 | = 3787891 | 611 (4.640) | coding (1054/1260 nt) | envC | activator of AmiB,C murein hydrolases, septal ring factor | |||||
| * | ? | NC_000913 | = 3787625 | 658 (4.810) | 4 (0.030) | 4/554 | NT | 0.62% | coding (788/1260 nt) | envC | activator of AmiB,C murein hydrolases, septal ring factor |
| ? | NC_000913 | = 3787742 | 638 (4.750) | coding (905/1260 nt) | envC | activator of AmiB,C murein hydrolases, septal ring factor | |||||