New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? BX571857 = 2057286301 (1.360)6 (0.030) 6/152 NT 2.3% intergenic (‑168/+45) SAS1905/SAS1906 hypothetical phage protein/hypothetical phage protein
?BX571857 2057751 = 245 (1.270)coding (501/921 nt) SAS1906 hypothetical phage protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 368 total aligned reads displayed.

AGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTT  >  BX571857/2057189‑2057383
                                                                                                 |                                                                                                 
aGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATT                                                                                                   >  1:3531‑M1/1‑98 (MQ=255)
    cccgtGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATGTAAg                                                                                               <  2:1495175/94‑1 (MQ=255)
     cccTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTaaata                                                                                              >  1:1510643‑M1/1‑93 (MQ=255)
      ccTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGAc                                                                                             <  2:1378757/98‑1 (MQ=255)
      ccTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGAc                                                                                             >  1:1457270/1‑98 (MQ=255)
      ccTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGAc                                                                                             >  2:1951050/1‑98 (MQ=255)
      ccTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGAc                                                                                             >  1:582568/1‑98 (MQ=255)
        tGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGt                                                                                           >  1:1035313/1‑98 (MQ=255)
        tGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGt                                                                                           >  2:477796/1‑98 (MQ=255)
         gCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTa                                                                                          >  2:1883304/1‑98 (MQ=255)
           tataTGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGc                                                                                        >  2:3318267/1‑98 (MQ=255)
           tataTGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGc                                                                                        >  1:2834674/1‑98 (MQ=255)
           tataTGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGc                                                                                        >  1:214109/1‑98 (MQ=255)
            atatGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCa                                                                                       <  1:2106650/98‑1 (MQ=255)
                gTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTa                                                                                   >  1:485613/1‑98 (MQ=255)
                gTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTa                                                                                   >  2:402624/1‑98 (MQ=255)
                  cTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTAcc                                                                                 >  1:1614000/1‑98 (MQ=255)
                  cTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTAcc                                                                                 <  2:2498629/98‑1 (MQ=255)
                    tGTTTTATATTTGAAGTGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCAc                                                                               <  1:2793036/98‑1 (MQ=255)
                     gTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACt                                                                              >  1:2604820/1‑98 (MQ=255)
                       tttATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTg                                                                            <  1:3285032/98‑1 (MQ=255)
                        ttATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGa                                                                           >  1:2373402/1‑98 (MQ=255)
                        ttATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGa                                                                           >  1:3148822/1‑98 (MQ=255)
                         tataTTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGaa                                                                          >  2:850634/1‑98 (MQ=255)
                          atatTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAAc                                                                         <  2:2381171/98‑1 (MQ=255)
                          atatTCGAAATGCTTTTGAACACGTTCAAACTTTATACCTGCCTCAAGTAGTACCGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAAc                                                                         >  2:704644/1‑98 (MQ=255)
                           tatTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAAcc                                                                        <  2:572853/98‑1 (MQ=255)
                            atTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCa                                                                       >  2:1748460/1‑98 (MQ=255)
                             ttttAAATGCTTTTGAACACGTTCAAATTTTATACCTTCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAg                                                                      <  2:634793/98‑1 (MQ=255)
                              ttGAGATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGt                                                                     <  2:518143/98‑1 (MQ=255)
                              ttGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCCTCATTTAAGACGTAGCAGCTACCACTTGAACCAgc                                                                     >  2:1523255/1‑97 (MQ=255)
                              ttGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGt                                                                     >  2:2744292/1‑98 (MQ=255)
                                  aaTGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCt                                                                 <  1:1113843/98‑1 (MQ=255)
                                  aaTGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCt                                                                 <  2:3628276/98‑1 (MQ=255)
                                   aTGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTa                                                                >  1:1274970/1‑98 (MQ=255)
                                   aTGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTa                                                                <  1:2899820/98‑1 (MQ=255)
                                   aTGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTa                                                                >  2:3300592/1‑98 (MQ=255)
                                   aTGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTa                                                                <  2:1570912/98‑1 (MQ=255)
                                   aTGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTa                                                                >  2:1664636/1‑98 (MQ=255)
                                     gCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTAtt                                                              <  2:2144504/98‑1 (MQ=255)
                                     gCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTAtt                                                              >  2:754031/1‑98 (MQ=255)
                                      cTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTg                                                             <  2:1043575/98‑1 (MQ=255)
                                      cTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTg                                                             <  2:1317735/98‑1 (MQ=255)
                                      cTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTg                                                             <  1:1864879/98‑1 (MQ=255)
                                       ttttGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGt                                                            <  1:3452666/98‑1 (MQ=255)
                                        tttGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGtt                                                           >  2:3568902/1‑98 (MQ=255)
                                         ttGAACACGTTCAAGTTTTATGCCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGttt                                                          <  2:1777650/98‑1 (MQ=255)
                                          tGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTc                                                         <  2:280428/98‑1 (MQ=255)
                                             acacGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAAt                                                      <  1:507476/98‑1 (MQ=255)
                                             acacGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAAt                                                      <  1:299977/98‑1 (MQ=255)
                                              cacGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAAtt                                                     >  2:886626/1‑98 (MQ=255)
                                              cacGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAAtt                                                     >  1:3347548/1‑98 (MQ=255)
                                                  ttCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTaaaa                                                 <  1:2080461/98‑1 (MQ=255)
                                                   tCAAATTTTATACCTGCCTCCACTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAAt                                                >  2:1121049/1‑98 (MQ=255)
                                                   tCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAAt                                                >  2:2570121/1‑98 (MQ=255)
                                                     aaaTTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTaaatacgattgtgcagtacgcaccgataatgttttctttgtcgatgttaaaga                                              <  1:1067769‑M1/98‑54 (MQ=255)
                                                      aaTTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGc                                             <  1:2756699/98‑1 (MQ=255)
                                                       aTTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGct                                            <  2:2771131/98‑1 (MQ=255)
                                                       aTTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGct                                            >  1:297137/1‑98 (MQ=255)
                                                        ttttATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGctc                                           >  1:1997535/1‑98 (MQ=255)
                                                        ttttATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGctc                                           <  2:2014253/98‑1 (MQ=255)
                                                           tataCCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCtcttc                                        <  1:2410143/98‑1 (MQ=255)
                                                           tataCCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCtcttc                                        <  1:2447694/98‑1 (MQ=255)
                                                           tataCCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTAGAACCAGTTGCTATTGTTTCAATTAAAATGGctctgc                                        >  2:1274262/1‑96 (MQ=255)
                                                            ataCCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCtcttct                                       <  2:3421115/98‑1 (MQ=255)
                                                            ataCCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCtcttct                                       <  2:241793/98‑1 (MQ=255)
                                                             taCCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTcttctt                                      >  1:3425149/1‑98 (MQ=255)
                                                             taCCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTcttctt                                      <  1:930296/98‑1 (MQ=255)
                                                             taCCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTcttctt                                      <  1:3545462/98‑1 (MQ=255)
                                                                cTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGc                                   >  1:1342497/1‑98 (MQ=255)
                                                                 tGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGct                                  <  1:457356/98‑1 (MQ=255)
                                                                    cTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGctttc                               >  2:2361208/1‑98 (MQ=255)
                                                                     tCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGctttct                              <  1:1798128/98‑1 (MQ=255)
                                                                     tCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGctttct                              <  2:3140026/98‑1 (MQ=255)
                                                                       aaGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGctttcttt                            <  1:1555151/98‑1 (MQ=255)
                                                                        agtagtAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCtttt                           >  1:79091/1‑98 (MQ=255)
                                                                        agtagtAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCtttt                           <  1:2675504/98‑1 (MQ=255)
                                                                        agtagtAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCtttt                           >  1:3064635/1‑98 (MQ=255)
                                                                        agtagtAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCtttt                           <  2:2980818/98‑1 (MQ=255)
                                                                         gtagtaACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCttttt                          >  2:435928/1‑98 (MQ=255)
                                                                           agtaACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCt                        >  2:1334678/1‑98 (MQ=255)
                                                                            gtaACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTg                       <  1:1727312/98‑1 (MQ=255)
                                                                             taACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGt                      >  2:1166122/1‑98 (MQ=255)
                                                                                cGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGc                   >  2:1440313/1‑98 (MQ=255)
                                                                                 gtagtaCGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCa                  <  2:3023277/98‑1 (MQ=255)
                                                                                   agtaCGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAgg                <  1:909561/98‑1 (MQ=255)
                                                                                   agtaCGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAgg                >  1:2341689/1‑98 (MQ=255)
                                                                                     taCGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGtt              <  2:232135/98‑1 (MQ=255)
                                                                                      aCGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTc             <  1:2580706/98‑1 (MQ=255)
                                                                                      aCGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGCTTCAATCAAAACGGCACATCTCCGCTTTCTTTTTCCGTTGCAGGtcc             >  2:974952/1‑96 (MQ=255)
                                                                                       cGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCt            >  1:3203386/1‑98 (MQ=255)
                                                                                        gTCCTTCATTaaatacgattgtgcagtacgcaccgataatgttttctttgtcgatgttaaagaagtcttgttcgtgcttaatcgctttgatacgtcct           <  2:2892267‑M1/98‑89 (MQ=255)
                                                                                        gTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCtt           <  1:726730/98‑1 (MQ=255)
                                                                                          ccATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCtttt         <  2:324566/98‑1 (MQ=255)
                                                                                            atcatTaaatacgattgtgcagtacgcaccgataatgttttctttgtcgatgttaaagaagtcttgttcgtgcttaatcgctttgatacgtcctgttt       <  1:2480064‑M1/98‑93 (MQ=255)
                                                                                             tcatTaaatacgattgtgcagtacgcaccgataatgttttctttgtcgatgttaaagaagtcttgttcgtgcttaatcgctttgatacgtcctgtttc      >  1:386396‑M1/1‑5 (MQ=255)
                                                                                               atTaaatacgattgtgcagtacgcaccgataatgttttctttgtcgatgttaaagaagtcttgttcgtgcttaatcgctttgatacgtcctgtttctc    <  1:2318479‑M1/98‑96 (MQ=255)
                                                                                               agttAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATttc    <  1:1963121/96‑1 (MQ=255)
                                                                                                tttAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATttct   <  1:622957/98‑1 (MQ=255)
                                                                                                 ttAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATttctt  >  1:2210321/1‑98 (MQ=255)
                                                                                                 |                                                                                                 
AGACACCCTGCTATATGTCTTGTTTTATATTTGAAATGCTTTTGAACACGTTCAAATTTTATACCTGCCTCAAGTAGTAACGTAGTACGTCCATCATTTAAGACGTAGCAGTTACCACTTGAACCAGTTGCTATTGTTTCAATTAAAATGGCTCTTCTTCGCTTTCTTTTTCTGTTGCAGGTTCTTTTATTTCTT  >  BX571857/2057189‑2057383

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.