| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 205612 | 28 (0.950) | 12 (0.420) | 8/236 | NT | 31.2% | coding (11118/26049 nt) | PP_0168 | putative surface adhesion protein |
| ? | NC_002947 | = 205620 | 26 (0.920) | coding (11126/26049 nt) | PP_0168 | putative surface adhesion protein | |||||
GCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/205462‑205612‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacc‑ACTTCGTCGGTGGTGTCGGTCACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTCGCACCAGTGGCATCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCATCGTTGTAGACGTCATCGCCCTGCGCAGCG < NC_002947/205620‑205474 GCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCAC > 2:736369/1‑150 GATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACC‑ACTTCGTCGGTGGTGTC < 2:522687/143‑1 GATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACC‑ACTTCGTCGGTGGTGTC > 1:522687/1‑143 GATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACC‑ACTTCGTCGGTGGTGTCG < 2:497538/90‑1 GATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACC‑ACTTCGTCGGTGGTGTCG > 1:497538/1‑90 CACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACC‑ACTTCGTCGGTG > 1:54947/1‑79 CACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACC‑ACTTCGTCGGTG < 2:54947/79‑1 CAACGCTTCGGTTCAAGTCACCGACACCACC‑ACTTCGTCGGTGGT > 1:635432/1‑45 CAACGCTTCGGTTCAAGTCACCGACACCACC‑ACTTCGTCGGTGGT < 2:635432/45‑1 AGTGACCGACACCACCGACGAAGT‑GGTGGTGTCGGTCACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAG > 1:587127/1‑79 AGTGACCGACACCACCGACGAAGT‑GGTGGTGTCGGTCACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAG < 2:190020/79‑1 AGTGACCGACACCACCGACGAAGT‑GGTGGTGTCGGTCACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAG > 1:190020/1‑79 AGTGACCGACACCACCGACGAAGT‑GGTGGTGTCGGTCACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAG < 2:587127/79‑1 CCACC‑ACTTCGTCGGTGGTGTCGGTCACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTCGCACCAGTGGCATCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCATCGTTGTAGACGTCATCGCCCTGCGCAG > 2:41817/1‑150 CCACC‑ACTTCGTCGGTGGTGTCGGTCACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTCGCACCAGTGGCATCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCATCGTTGTAGACGTCATCGCCCTGCGCAG > 2:507438/1‑150 CACC‑ACTTCGTCGGTGGTGTCGGTCACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTCGCACCAGTGGCATCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCATCGTTGTAGACGTCATCGCCCTGCGCAGC > 2:703198/1‑150 CACC‑ACTTCGTCGGTGGTGTCGGTCACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTCGCACCAGTGGCATCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCATCGTTGTAGACGTCATCGCCCTGCGCAGC < 1:41817/150‑1 ACC‑ACTTCGTCGGTGGTGTCGGTCACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTCGCACCAGTGGCATCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCATCGTTGTAGACGTCATCGCCCTGCGCAGCG > 2:624564/1‑150 GCCGTACACCCACGCTGCGCAGGGCGATGACGTCTACAACGATGCTGGCCAGATCAGCCTGGGTATCAACTCGGCGGTGGATGCCACTGGTGCGACCTTCGAGAACCTGCAACTGGGCGGCAACGCTTCGGTTCAAGTGACCGACACCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/205462‑205612‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacc‑ACTTCGTCGGTGGTGTCGGTCACTTGAACCGAAGCGTTGCCGCCCAGTTGCAGGTTCTCGAAGGTCGCACCAGTGGCATCCACCGCCGAGTTGATACCCAGGCTGATCTGGCCAGCATCGTTGTAGACGTCATCGCCCTGCGCAGCG < NC_002947/205620‑205474 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |