New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	332790 =	36 (1.220)	3 (0.110)	3/220	NT	8.8%	intergenic (‑102/‑74)	PP_0273/PP_5435	hypothetical protein/hypothetical protein
	?	NC_002947	332821 =	30 (1.140)					intergenic (‑133/‑43)	PP_0273/PP_5435	hypothetical protein/hypothetical protein

CGTGGACTTCAATCGCCTTGGTAACCGCCGCTTTCGTTATGACCCGCATTGTGTTGTCCCGGCGCACCAACATAGGGTGGAAAATATCTCCGATCCAGATATCT‑GTCAACCAGATATCTGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/332912‑332790 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagatatctggatCGGAGATATTTTCCACCCTATGTTGGTGCGCCGGGACAACACAATGCGGGTCATAACGAAAGCGGCGGTTACCAAGGCGATTGAAGTCCACGGCCAGTGGAAAGCGCCCCTAAGCCTGTGGCTGACGACCTTCGACAGGGCGACG  >  NC_002947/332821‑332965                                                                                                                                                                                                                                                                               CGTGGACTTCAATCGCCTTGGTAACCGCCGCTTTCGTTATGACCCGCATTGTGTTGTCCCGGCGCACCAACATAGGGTGGAAAATATCTCCGATCCAGATATCTGGTTGA‑CAGATATCTGGATCGGAGATATTTTCCACCCTATGTTGGT                                                                                                                        <  2:549887/150‑1                          CGCCGCTTTCGTTATGACCCGCATTGTGTTGTCCCGGCGCACCAACATAGGGTGGAAAATATCTCCGATCCAGATATCTGGTTGA‑CAGATATCTGGATCGGAGATATT                                                                                                                                         <  2:623673/108‑1                          CGCCGCTTTCGTTATGACCCGCATTGTGTTGTCCCGGCGCACCAACATAGGGTGGAAAATATCTCCGATCCAGATATCT‑GGTTGACAGATATCTGGATCGGAGATATT                                                                                                                                         >  1:623673/1‑108                                                                                                              ACCAGATATCTGGATCGGAGATATTTTCCACCCTATGTTGGTGCGCCGGGACAACACAATGCGGGTCATAACGAAAGCGGCGGTTACCAAGGCGATTGAAGTCCACGGCCAGTGGAAAGCGCCCCTAAGCCTGTGGCTGACGACCTTCGA            <  1:549887/150‑1                                                                                                                 AGATATCTGGATCGGAGATATTTTCCACCCTATGTTGGTGCGCCGGGACAACACAATGCGGGTCATAACGAAAGCGGCGGTTACCAAGGCGATTGAAGTCCACGGCCAGTGGAAAGCGCCCCTAAGCCTGTGGCTGACGACCTTCGACAG         >  2:763699/1‑150                                                                                                                       CTGGATCGGAGATATTTTCCACCCTATGTTGGTGCGCCGGGACAACACAATGCGGGTCATAACGAAAGCGGCGGTTACCAAGGCGATTGAAGTCCACGGCCAGTGGAAAGCGCCCCTAAGCCTGTGGCTGACGACCTTCGACAGGGCGAC   <  1:563117/150‑1                                                                                                                        TGGATCGGAGATATTTTCCACCCTATGTTGGTGCGCCGGGACAACACAATGCGGGTCATAACGAAAGCGGCGGTTACCAAGGCGATTGAAGTCCACGGCCAGTGGAAAGCGCCCCTAAGCCTGTGGCTGACGACCTTCGACAGGGCGACG  >  1:380334/1‑150                                                                                                                                                                                                                                                                               CGTGGACTTCAATCGCCTTGGTAACCGCCGCTTTCGTTATGACCCGCATTGTGTTGTCCCGGCGCACCAACATAGGGTGGAAAATATCTCCGATCCAGATATCT‑GTCAACCAGATATCTGGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/332912‑332790 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagatatctggatCGGAGATATTTTCCACCCTATGTTGGTGCGCCGGGACAACACAATGCGGGTCATAACGAAAGCGGCGGTTACCAAGGCGATTGAAGTCCACGGCCAGTGGAAAGCGCCCCTAAGCCTGTGGCTGACGACCTTCGACAGGGCGACG  >  NC_002947/332821‑332965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.