| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 356613 = | 19 (0.640) | 6 (0.210) | 5/234 | NT | 23.5% | intergenic (‑407/‑46) | cbcX/tdcG‑I | choline/betaine/carnitine ABC transporter substrate‑binding protein/L‑serine dehydratase |
| ? | NC_002947 | 356630 = | 21 (0.750) | intergenic (‑424/‑29) | cbcX/tdcG‑I | choline/betaine/carnitine ABC transporter substrate‑binding protein/L‑serine dehydratase | |||||
GTCGAACACGCTGATGGCCATTGTCGAATCACCTCTTGCTGGGCTTGTCTCTGCGCGCCATGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/356679‑356613‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcagAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCG > NC_002947/356630‑356770 GTCGAACACGCTGATGGCCATTGTCGAATCACCTCTTGCTGGGCTTGTCTCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGA < 1:598676/84‑1GTCGAACACGCTGATGGCCATTGTCGAATCACCTCTTGCTGGGCTTGTCTCTGCGCATGGCGCGCAGAGACAAGCCCAGCAAGA > 2:598676/1‑84 CTTGTCTCTGCGCGCCATGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTC > 1:565303/1‑80 CTTGTCTCTGCGCGCCATGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTC < 2:565303/80‑1 TCTGCGCGCCATGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCATGGCCTGC > 1:746740/1‑150 TCTGCGCGCCATGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGC > 2:145326/1‑150 CATGCGCAGAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCATGGCCTGCGCGAACGCG < 2:746740/150‑1 GTCGAACACGCTGATGGCCATTGTCGAATCACCTCTTGCTGGGCTTGTCTCTGCGCGCCATGCGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/356679‑356613‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcagAGACAAGCCCAGCAAGAGGTGATTCGACAATGGCCATCAGCGTGTTCGACCTGTTCAAGATCGGTGTCGGGCCCTCCAGCTCCCACACCGTCGGCCCCATGCGTGCTGGCGCCCTGTTCGTTCAGGGCCTGCGCGAACGCG > NC_002947/356630‑356770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |