New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 380836 = | 36 (1.220) | 5 (0.210) | 5/200 | NT | 13.3% | intergenic (+23/+86) | gbcB/PP_0317 | glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer |
? | NC_002947 | 380916 = | 36 (1.500) | intergenic (+103/+6) | gbcB/PP_0317 | glycine‑betaine dioxygenase subunit/methyl‑accepting chemotaxis transducer |
GCATCAGACCAGCGCGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATG‑ACCCTGTGGGAGCGGGCGTGCCCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/381003‑380836 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggcgtgcccgcgaCTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAGCACTCTGCACCGACAGGTCGTTGATGTTCACCAGGTTGCGG > NC_002947/380916‑381054 GCATCAGACCAGCGCGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATG‑ACCCTGTGG < 1:744399/150‑1 GCGCGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATG‑ACCCTGTGGGAGCGGGCGTG > 1:773731/1‑150 GAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATG‑ACCCTGTGGGAGCGGGCACGCCCGCtc < 2:5688/150‑3 CACAAGGTTCACCGCAGTCCTGAAGATAGCGATG‑ACCCTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGC < 1:329718/116‑1 CACAAGGTTCACCGCAGTCCTGAAGATAGCGATG‑ACCCTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGC > 2:329718/1‑116 ACAAGGTTCACCGCAGTCCTGAAGATAGCGATGAACCTTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCG > 2:612688/1‑150 GGTTCACCGCAGTCCTGAAGATAGCGATG‑ACCCTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAG < 1:32410/95‑1 GGTTCACCGCAGTCCTGAAGATAGCGATG‑ACCCTGTGGGAGCGGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAG > 2:32410/1‑95 GGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTAC < 1:643417/59‑1 GGGCGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTAC > 2:643417/1‑59 CGTGCCCGCGACTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAGCACTCTGCACCGACAGGTCGTTGATGTTCACCAGGTTGCGG < 1:487617/150‑1 GCATCAGACCAGCGCGGCGAGTGCCGAGCTGTCGCGCCTGGCGGTAGACCTCAATGGCCTGGTAGCCCGGTTCCGCACCTAGAAGCAGTCGCGGGCACGCCCGCTCCCACAAGGTTCACCGCAGTCCTGAAGATAGCGATG‑ACCCTGTGGGAGCGGGCGTGCCCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/381003‑380836 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtgggagcgggcgtgcccgcgaCTGCTTCTAGGTGCGGAACCGGGCTACCAGGCCATTGAGGTCTACCGCCAGGCGCGACAGCTCGGCACTCGCCGCGCTGGTCTGATGCGCCCCGGTAGCACTCTGCACCGACAGGTCGTTGATGTTCACCAGGTTGCGG > NC_002947/380916‑381054 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |