New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	390237 =	31 (1.050)	3 (0.110)	3/232	NT	9.8%	coding (508/3015 nt)	soxA	sarcosine oxidase subunit alpha
	?	NC_002947	390307 =	26 (0.930)					coding (578/3015 nt)	soxA	sarcosine oxidase subunit alpha

AGCAGGCTTGCCGTCGAGGGTTTCGCGGGTGTCGAGCAGGCTGCCGCCGAACTCTTCCTGCTCGTCAGCCAGGATCACGCGGGCACCACTGCGCGCAGCGGCCAGTGCGGCAGCCAGGCCAGCAGGGCCGGCGCCGACGATCAGCACGTCGCAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/390392‑390237 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcagtgGTGCCCGCGTGATCCTGGCTGACGAGCAGGAAGAGTTCGGCGGCAGCCTGCTCGACACCCGCGAAACCCTCGACGGCAAGCCTGCTGCCGACTGGGTCAACGCCGTGGTCAAAGAGCTGGAAGGCCTGCCGGAAGTGACCCTG  >  NC_002947/390307‑390449                                                                                                                                                                                                                                                                                                             AGCAGGCTTGCCGTCGAGGGTTTCGCGGGTGTCGAGCAGGCTGCCGCCGAACTCTTCCTGCTCGTCAGCCAGGATCACGCGGGCACCACTGCGCGCAGCGGCCAGTGCGGCAGCCAGGCCAGCAGGGCCGGCGCCGACGATCAGCACGTC                                                                                                                                                       >  2:239681/1‑150                                                                        GGATCACGCGGGCACCACTGCGCGCAGCGGCCAGTGCGGCAGCCAGGCCAGCAGGGCCGGCGCCGACGATCAGCACGTCGCAGTGGTGCCCGCGTGATCCTGGCTGACGAGCAGGAAGAGTTCGGCGGCAGCCTGCTCGACACCCGCGAA                                                                                >  1:115505/1‑150                                                                                         CTGCGCGCAGCGGCCAGTGCGGCAGCCAGGCCAGCAGGGCCGGCGCCGACGATCAGCACGTCGCAGTGGTGCCCGCGTGATCCTGGCTGACGAGCAGGAAGAGTTCGGCGGCAGCCTGCTCGACACCCGCGAAACCCTCGACGGCAAGCC                                                               >  1:184655/1‑150                                                                                                   CGGCCAGTGCGGCAGCCAGGCCAGCAGGGCCGGCGCCGACGATCAGCACGTCGCAGTGGTGCCCGCGTGATCCTGGCTGACGAGCAGGAAGAGTTCGGCGGCAGCCTGCTCGACACCCGCGAAACCCTCGACGGCAAGCCTGCTGCCGAC                                                     <  2:184655/150‑1                                                                                                                                                      CGCAGTGGTGCCCGCGTGATCCTGGCTGACGAGCAGGAAGAGTTCGGCGGCAGCCTGCTCGACACCCGCGAAACCCTCGACGGCAAGCCTGCTGCCGACTGGGTCAACGCCGTGGTCAAAGAGCTGGAAGGCCTGCCGGAAGTGACCCTG  <  2:211094/150‑1                                                                                                                                                                                                                                                                                                             AGCAGGCTTGCCGTCGAGGGTTTCGCGGGTGTCGAGCAGGCTGCCGCCGAACTCTTCCTGCTCGTCAGCCAGGATCACGCGGGCACCACTGCGCGCAGCGGCCAGTGCGGCAGCCAGGCCAGCAGGGCCGGCGCCGACGATCAGCACGTCGCAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/390392‑390237 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcagtgGTGCCCGCGTGATCCTGGCTGACGAGCAGGAAGAGTTCGGCGGCAGCCTGCTCGACACCCGCGAAACCCTCGACGGCAAGCCTGCTGCCGACTGGGTCAACGCCGTGGTCAAAGAGCTGGAAGGCCTGCCGGAAGTGACCCTG  >  NC_002947/390307‑390449

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.