New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 428663	36 (1.220)	3 (0.100)	3/240	NT	7.7%	coding (347/957 nt)	PP_0351	transmembrane sensor
	?	NC_002947	= 428728	37 (1.280)					coding (282/957 nt)	PP_0351	transmembrane sensor

GTCCTGGTGGCCGGTTTCGACCGAGATTTCGCCCTGGTGCAGCACGATCACCCGTTGCGCGCCGGCGTACTCGATGTCCACGGCGGTGTGGGTGTTCAGGCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/428512‑428663 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggCGCGCTGCTGGCATGGGTCGGCGCCCCGTCGCTGGCACCCAGCTACTGGCTGGCCGACCAGCGCACCGCCACGGGTGAATTACGCACCTTGCGCCTAGAAGACGGCACACTGCTGAGCCTGAACACCCACACCGCCGTGGACATCGAG  <  NC_002947/428728‑428581                                                                                                                                                                                                                                                                                                              GTCCTGGTGGCCGGTTTCGACCGAGATTTCGCCATGATGCAGGCCGGTGAGCTGGTGCGCGCCGGCGTACGCGATGTCCACGGCGGTGTGGGTGTTCAGGCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGC                                                                                                                                                        >  1:536871/1‑150                                                TCACCCGTTGCGCGCCGGCGTACTCGATGTCCACGGCGGTGTGGGTGTTCAGGCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGCGCGCTGCTGGCATGGGTCGGCGCCCCGTCGCTGGCACCCAGCTA                                                                                                         >  1:305588/1‑150                                                               CGGCGTACTCGATGTCCACGGCGGTGTGGGTGTTCAGGCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGCGCGCTGCTGGCATGGGTCGGCGCCCCGTCGCTGGCACCCAGCTACTGGCTGGCCGACCA                                                                                          <  2:305588/150‑1                                                                                               TTCAGGCGCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATCCACCCGTGGCGGCGCGCTGCTGGCATGGGTCGGCGCCCCGTCGCTGGCACCCAGCTACTGGCTGGCCGACCAGCGCACCGCCACGCGTGAATTACGCACCTTGC                                                          <  2:187352/150‑1                                                                                                                                                       GGCGCGCTGCTGGCATGGGTCGGCGCCCCGTCGCTGGCACCCAGCTACTAAGTGGCCGACCAGCGCACCGCCACGGGTGAATTACGCACCTTGCGACTAGAAGACGGCACACTGCTGAGCCTGAACACCCACACCGCCGTGGACATCGAG  >  1:145456/1‑150                                                                                                                                                                                                                                                                                                              GTCCTGGTGGCCGGTTTCGACCGAGATTTCGCCCTGGTGCAGCACGATCACCCGTTGCGCGCCGGCGTACTCGATGTCCACGGCGGTGTGGGTGTTCAGGCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/428512‑428663 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggCGCGCTGCTGGCATGGGTCGGCGCCCCGTCGCTGGCACCCAGCTACTGGCTGGCCGACCAGCGCACCGCCACGGGTGAATTACGCACCTTGCGCCTAGAAGACGGCACACTGCTGAGCCTGAACACCCACACCGCCGTGGACATCGAG  <  NC_002947/428728‑428581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.