New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 428663	36 (1.220)	3 (0.100)	3/240	NT	7.7%	coding (347/957 nt)	PP_0351	transmembrane sensor
	?	NC_002947	= 428728	37 (1.280)					coding (282/957 nt)	PP_0351	transmembrane sensor

CTCGATGTCCACGGCGGTGTGGGTGTTCAGGCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCCATGGCGCCGAGCTGGCGCCAGGCACGTGC  >  NC_002947/428581‑428877                                                                                                                                                    |                                                                                                                                                      cTCGATGTCCACGGCGGTGTGGGTGTTCAGGCTCAGCAGTGTGCCGTCTTCTAGTCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCACTTAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGcc                                                                                                                                                     >  1:145456‑M2/1‑148 (MQ=255)           aCGGCGGTGTGGGTGTTCAGGCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAAc                                                                                                                                           >  1:588350/1‑150 (MQ=255)             ggcggTGTGGGTGTTCAGGCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGt                                                                                                                                         <  1:254366/150‑1 (MQ=255)                ggTGTGGGTGTTCAGGCTCAGCAGTGCGCCGTCTTCAAGTTTTAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCCGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCAGAGCAGAAACGTGcc                                                                                                                                      <  1:564013/150‑1 (MQ=255)                          ttCAGGCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCccg                                                                                                                            >  1:255387/1‑150 (MQ=255)                          ttCAGGCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCccg                                                                                                                            >  2:502776/1‑150 (MQ=255)                             aGGCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCccgccg                                                                                                                         >  1:173764/1‑150 (MQ=255)                               gCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCgccgcc                                                                                                                       >  2:454478/1‑150 (MQ=255)                                    gcagTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCt                                                                                                                  >  1:798702/1‑150 (MQ=255)                                       gtgtGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGc                                                                                                               <  1:785493/150‑1 (MQ=255)                                           gCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAAt                                                                                                           <  2:588350/150‑1 (MQ=255)                                           gCCGTCTTCTAGGCGCAAGGAGCGTCATTTACCCGTGGCGGTGTGCTGGTCGGCGAGACAGTAACTGGGTGCCAGCGACGGGGCGGCGCCCAACGCCAGCAGCGCACCGAGCAGAAGCGTGCCGGCCAGATCGCCGCGAATCTTTCTAAt                                                                                                           >  2:325270/1‑150 (MQ=255)                                            ccGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATg                                                                                                          >  1:737635/1‑150 (MQ=255)                                             cGTCTTCTAGGCGCAAGGTGCGTAATTCATCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGc                                                                                                         >  2:293956/1‑150 (MQ=255)                                             cGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGc                                                                                                         <  2:255387/150‑1 (MQ=255)                                               tcttctAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGt                                                                                                       >  2:117050/1‑150 (MQ=255)                                                     aGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTcgccgc                                                                                                 >  2:194926/1‑150 (MQ=255)                                                         gcAAGGTGCGTAATTCACGCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGccgccacgggtggattacgcaccttgcgcctagaagacggcacactgctgcgcctgaa                                                                                             <  2:187352‑M2/150‑59 (MQ=255)                                                                     aTTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGAtt                                                                                 >  1:58678/1‑150 (MQ=255)                                                                      ttCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTg                                                                                <  2:749611/150‑1 (MQ=255)                                                                      ttCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTg                                                                                <  2:749628/150‑1 (MQ=255)                                                                                        cTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCTCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAAt                                                                                                           >  1:725255/1‑105 (MQ=255)                                                                                        cTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCTCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAAt                                                                                                           <  2:725255/105‑1 (MQ=255)                                                                                         tGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGccgccacgggtgaattacgcaccttgcgcctagaagacggcacactgctgagcctgaacacccacaccgccgtggacatcgagtacgccg                                                             <  2:305588‑M2/150‑91 (MQ=255)                                                                                                   gccagTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTg                                                   <  2:798702/150‑1 (MQ=255)                                                                                                    cccgTAGCTGGGTGCCAGCTACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGGCACGGCGAGCCCGCCGTGCACCTTGCCAATGCGTCGCCGCAGGCCGCCGTGCCCTTGTAGCAGCGCCTGGCGTGCCGGGCCAGCTGc                                                  <  1:454478/147‑1 (MQ=255)                                                                                                    ccagTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGc                                                  >  1:132854/1‑150 (MQ=255)                                                                                                        tAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGccgccacgggtgaattacgcaccttgcgcctagaagacggcacactgctgagcctgaacacccacaccgccgtggacatcgagtacgccggcgcgcaacgggtga                                              >  1:305588‑M2/1‑45 (MQ=255)                                                                                                            tGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTaa                                          >  2:275393/1‑150 (MQ=255)                                                                                                                  ccAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGtt                                    <  1:117050/150‑1 (MQ=255)                                                                                                                   cAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGTTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTg                                   <  2:317553/150‑1 (MQ=255)                                                                                                                     gCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGt                                 <  2:132854/150‑1 (MQ=255)                                                                                                                          ggggCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCCATg                            >  2:105012/1‑150 (MQ=255)                                                                                                                          ggggCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCCATg                            >  2:466688/1‑150 (MQ=255)                                                                                                                          ggggCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCCATg                            <  1:502776/150‑1 (MQ=255)                                                                                                                             gcgcCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCCATGgcg                         >  2:721777/1‑150 (MQ=255)                                                                                                                              agtggACCCCTGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCGAATGAGTCGCCCCAGGCTGGCGCGCGCTTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCCATGgcgc                        <  1:8228/146‑1 (MQ=255)                                                                                                                               gcCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCCATGGCGcc                       >  2:22447/1‑150 (MQ=255)                                                                                                                                   aCCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGc                                                  <  2:283144/119‑1 (MQ=255)                                                                                                                                   aCCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGc                                                  >  1:283144/1‑119 (MQ=255)                                                                                                                                              cagcGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCCATGGCGCCGAGCTGGCGCCAGGc        <  1:22447/150‑1 (MQ=255)                                                                                                                                                    gcCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCCATGGCGCCGAGCTGGCGCCAGGCAcgtgc  <  2:737635/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                      CTCGATGTCCACGGCGGTGTGGGTGTTCAGGCTCAGCAGTGTGCCGTCTTCTAGGCGCAAGGTGCGTAATTCACCCGTGGCGGTGCGCTGGTCGGCCAGCCAGTAGCTGGGTGCCAGCGACGGGGCGCCGACCCATGCCAGCAGCGCGCCGAGCAGAAACGTGCCGGCCAGCCCGCCGCCAACCTTGCCAATGCGTCGCCGCAGGCTGGCGCGCGATTGCAGCAGCGCCTGGCGTGCCGGGCCAGCTGCCGCGCTAACGCGTTGGTCCATGGCGCCGAGCTGGCGCCAGGCACGTGC  >  NC_002947/428581‑428877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.