| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 636215 | 43 (1.460) | 4 (0.140) | 4/234 | NT | 8.9% | coding (436/1350 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
| ? | NC_002947 | = 636232 | 41 (1.460) | coding (453/1350 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase | |||||
CGGTACTCACGGCAAGACCACCACCAGCAGCATGCTGGCCTGGGTGCTGGAGCACGCCGGCATGAGCCCGGGCTTCCTGATTGGCGGCGTGCCGCAGAACTTCTCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/636106‑636215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgtGTCGCCCAAGCGGGCCGACGCCGAGAAGTTCTGCGGCACGCCGCCAATCAGGAAGCCCGGGCTCATGCCGGCGTGCTCCAGCACCCAGGCCAGCATGCTGCTGGTGGTGGTCTTGCCGTGAGTACCGGCAACGGCCAGCACCCAGCGGC < NC_002947/636232‑636084 CGGTACTCACGGCAAGACCACCACCAGCAGCATGCTGGCCTGGGTGCTGGAGCACGCCGGCATGAGCCCGGGCTTCCTGATTGGCGGCGTGCCGCAGAACTTCTCGGCGTGTCGCCCAAGCGGGCCGACGCCGAGAAGTTCTGC < 1:361528/144‑1CGGTACTCACGGCAAGACCACCACCAGCAGCATGCTGGCCTGGGTGCTGGAGCACGCCGGCATGAGCCCGGGCTTCCTGATTGGCGGCGTGCCGCAGAACTTCTCGGCGTGTCGCCCAAGCGGGCCGACGCCGAGAAGTTCTGC > 2:361528/1‑144 CCAGCAGCATGCTGGCCTGGGTGCTGGAGCACGCCGGCATGAGCCCGGGCTTCCTGATTGGCGGCGTGCCGCAGAACTTCTCGGCGTGTCGCCCAAGCGGGCCGACGCCGAGAA > 1:732800/1‑114 CCAGCAGCATGCTGGCCTGGGTGCTGGAGCACGCCGGCATGAGCCCGGGCTTCCTGATTGGCGGCGTGCCGCAGAACTTCTCGGCGTGTCGCCCAAGCGGGCCGACGCCGAGAA < 2:732800/114‑1 TGTCGCCCAAGCGGGCCGACGCCGAGAAGTTCTGCGGCACGCCGCCAATCAGGAAGCCCGGGCTCATGCCGGCGTGCTCCAGCACCCAGGCCAGCATGCTGCTGGTGGTGGTCTTGCCGTGAGTACCGGCAACGGCCAGCACCCAGCGGC < 2:502421/150‑1 CGGTACTCACGGCAAGACCACCACCAGCAGCATGCTGGCCTGGGTGCTGGAGCACGCCGGCATGAGCCCGGGCTTCCTGATTGGCGGCGTGCCGCAGAACTTCTCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/636106‑636215‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgtGTCGCCCAAGCGGGCCGACGCCGAGAAGTTCTGCGGCACGCCGCCAATCAGGAAGCCCGGGCTCATGCCGGCGTGCTCCAGCACCCAGGCCAGCATGCTGCTGGTGGTGGTCTTGCCGTGAGTACCGGCAACGGCCAGCACCCAGCGGC < NC_002947/636232‑636084 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |