New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	675325 =	33 (1.120)	3 (0.110)	3/234	NT	7.9%	coding (377/696 nt)	PP_0577	hypothetical protein
	?	NC_002947	675387 =	39 (1.390)					coding (315/696 nt)	PP_0577	hypothetical protein

GCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCAGCGGTGCGCTCGACCAGCATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/675477‑675325 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgcACCGCTGACGGCATCGGCCAGTTGCGCCGGGTCGGCATCGACAGTGCCGCTGGGCAACTGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGG  >  NC_002947/675387‑675534                                                                                                                                                                                                                                                                                                               GCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCAGCGGTGCGCTCGACCAGCATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAG                                                                                                                                                         >  1:248604/1‑150   ACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCAGCGGTGCGCTCGACCAGCATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAGCG                                                                                                                                                       >  2:657459/1‑150    CTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCAGCGGTGCGCTCGACCAGCATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAGCGC                                                                                                                                                      <  1:383502/150‑1                                                                                               CTCGACCAGCATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAGCGCACCGCTGACGGCATCGGCCAGTTGCGCCGGGTCGGCATCGACAGTGCCGCTGGGCAACTGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGC                                                           >  1:466147/1‑150                                                                                                TCGACCAGCATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAGCGCACCGCTGACGGCATCGGCCAGTTGCGCCGGGTCGGCATCGACAGTGCCGCTGGGCAACTGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCC                                                          >  1:396211/1‑150                                                                                                        CATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAGCGCACCGCTGACGGCATCGGCCAGTTGCGCCGGGTCGGCATCGACAGTGCCGCTGGGCAACTGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATGATCA                                                  <  2:396211/150‑1                                                                                                                                                      GCGCACCGCTGACGGCATCGGCCAGTTGCGCCGGGTCGGCATCGACAGTGCCGCTGGGCAACTGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTG              <  1:33480/140‑1                                                                                                                                                      GCGCACCGCTGACGGCATCGGCCAGTTGCGCCGGGTCGGCATCGACAGTGCCGCTGGGCAACTGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTG              >  2:33480/1‑140                                                                                                                                                        GCACCGCTGACGGCATCGGCCAGTTGCGCCGGGTCGGCATCGACAGTGCCGCTGGGCAACTGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGG  <  2:11985/150‑1                                                                                                                                                                                                                                                                                                               GCACTACCGCAGCTGGAGCTGGCGCAACGGCCAGTTGCCCAGCGGCACTGTCGATGCCGACCCGGCGCAACTGGCCGATGCCGTCAGCGGTGCGCTCGACCAGCATGGCCTGCGCCCCTCTCGCGCAGGCCCTGGCGACTTGCTGGTGAGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/675477‑675325 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgcACCGCTGACGGCATCGGCCAGTTGCGCCGGGTCGGCATCGACAGTGCCGCTGGGCAACTGGCCGTTGCGCCAGCTCCAGCTGCGGTAGTGCCCATAATCACGAGCGGGCGCAGGGTAAGCACTGGCGTCGAAGGTGGTGGCCGCCTGG  >  NC_002947/675387‑675534

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.