| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 846685 = | 21 (0.710) | 4 (0.140) | 4/238 | NT | 15.6% | coding (518/1191 nt) | PP_0729 | hypothetical protein |
| ? | NC_002947 | 846705 = | 23 (0.800) | coding (498/1191 nt) | PP_0729 | hypothetical protein | |||||
TACTGACGGTGTCACTACCGGCAACGAGACTGTGCATGCTTTCGTCTCCCTTGGCAGCGAAGCGGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/846753‑846685‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagGGAGACGAAAGCATGCACAGTCTCGTTGCCGGTAGTGACACCGTCAGTACTGGCACCTGGTACATAGTCAACTACGTAATATGGCAAACCCGTCTCTGGATCACGGGTCATCGCCACTCCGCTGGCCAATACTCCTCTCGCCATCTGC > NC_002947/846705‑846852 TACTGACGGTGTCACTACCGGCAACGAGACTGTGCATGCTTTCGTCTCCCTTGGCAGCGAAGCGGCAA > 1:491498/1‑68TACTGACGGTGTCACTACCGGCAACGAGACTGTGCATGCTTTCGTCTCCCTTGGCAGCGAAGCGGCAA < 2:491498/68‑1 ATGCTTTCGTCTCCCTTGGCAGCGAAGCGGCAAGGGAGACGAAAGCATGCACAGTCTCGTTGCCGGTAGTGACACCGTCAGTACTGGCACCTGG < 1:323859/94‑1 ATGCTTTCGTCTCCCTTGGCAGCGAAGCGGCAAGGGAGACGAAAGCATGCACAGTCTCGTTGCCGGTAGTGACACCGTCAGTACTGGCACCTGG > 2:323859/1‑94 TCTCCCTTGGCAGCGAAGCGGCAAGGGAGACGAAAGCATGCACAGTCTCGTTGCCGGTAGTGACACCGTCAGTACTGGCACCTGGTACATAGTC < 1:342087/94‑1 TCTCCCTTGGCAGCGAAGCGGCAAGGGAGACGAAAGCATGCACAGTCTCGTTGCCGGTAGTGACACCGTCAGTACTGGCACCTGGTACATAGTC > 2:342087/1‑94 AGGGAGACGAAAGCATGCACAGTCTCGTTGCCGGTCGTTACACCGTCAGTACTGGCACCTGGTACATAGTCAACTACGTAATATGGCAAACCCGTCTCTGGATCACGGGTCATCGCCACTCCGCTGGCCAATACTCCTCTCGCCATCTGC < 1:243526/150‑1 TACTGACGGTGTCACTACCGGCAACGAGACTGTGCATGCTTTCGTCTCCCTTGGCAGCGAAGCGGCAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/846753‑846685‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caagGGAGACGAAAGCATGCACAGTCTCGTTGCCGGTAGTGACACCGTCAGTACTGGCACCTGGTACATAGTCAACTACGTAATATGGCAAACCCGTCTCTGGATCACGGGTCATCGCCACTCCGCTGGCCAATACTCCTCTCGCCATCTGC > NC_002947/846705‑846852 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |