| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1241526 = | 24 (0.810) | 3 (0.110) | 7/232 | NT | 12.6% | intergenic (+12/‑80) | PP_1080/grxD | molybdopterin‑binding oxidoreductase/monothiol glutaredoxin |
| ? | NC_002947 | 1241545 = | 19 (0.680) | intergenic (+31/‑61) | PP_1080/grxD | molybdopterin‑binding oxidoreductase/monothiol glutaredoxin | |||||
GCGAGCCTTTCATGTAAAGCAGAATGGTGTTGTTGGCAATCTGCTCTTTGATCGTTTCGATGATATCCATGTAGCACCTCGGCTGAACTATCCGACACAGTCGTCGGCACGGTGTCGCATTGTATCGGAAAGCCGAGCGCCGTGCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1241675‑1241526‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcggcTTTCCGATACAATGCGACACCGTG > NC_002947/1241545‑1241568 GCGAGCCTTTCATGTAAAGCAGAATGGTGTTGTTGGCAATCTGCTCTTTGATCGTTTCGATGATATCCATGTAGCACCTCGGCTGAACTATCCGACACAGTCGTCGGCACGGTGTCGCATTGTATCGGAAAGCCGAGCACGGCGCTCGGC > 2:286677/1‑150 TGGTGTTGTTGGCAATCTGCTCTTTGATCGTTTCGATGATATCCATGTAGCACCTCGGCTGAACTATCCGACACAGTCGTCGGCACGGTGTCGCATTGTATCGGAAAGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTG < 1:286677/150‑1 GCAATCTGCTCTTTGATCGTTTCGATGATATCCATGTAGCACCTCGGCTGAACTATCCGACACAGTCGTCGGCACGGTGTCGCATTGTATCGGAAAGCCGAGCACGGCGCTCGGCTTTC > 1:603961/1‑119 GCAATCTGCTCTTTGATCGTTTCGATGATATCCATGTAGCACCTCGGCTGAACTATCCGACACAGTCGTCGGCACGGTGTCGCATTGTATCGGAAAGCCGAGCACGGCGCTCGGCTTTC < 2:603961/119‑1 ATCCATGTAGCACCTCGGCTGAACTATCCGACACAGTCGTCGGCACGGTGTCGCATTGTATCGGAAGGCCGAGCACGGCGCTCGGCTTTC > 1:395045/1‑90 ATCCATGTAGCACCTCGGCTGAACTATCCGACACAGTCGTCGGCACGGTGTCGCATTGTATCGGAAGGCCGAGCACGGCGCTCGGCTTTC < 2:395045/90‑1 ATGTAGCACCTCGGCTGAACTATCCGACACAGTCGTCGGCACGGTGTCGCATTGTATCGGAAAGCCGAGCACGGCGCTCGGCTTTCCGA > 1:294921/1‑89 ATGTAGCACCTCGGCTGAACTATCCGACACAGTCGTCGGCACGGTGTCGCATTGTATCGGAAAGCCGAGCACGGCGCTCGGCTTTCCGA < 2:294921/89‑1 TCCGACACAGTCGTCGGCACGGTGTCGCATTGTATCGGAAAGCCGAGCGCCGTGCTCGGC < 1:177783/60‑1 TCCGACACAGTCGTCGGCACGGTGTCGCATTGTATCGGAAAGCCGAGCGCCGTGCTCGGC > 2:177783/1‑60 GCGAGCCTTTCATGTAAAGCAGAATGGTGTTGTTGGCAATCTGCTCTTTGATCGTTTCGATGATATCCATGTAGCACCTCGGCTGAACTATCCGACACAGTCGTCGGCACGGTGTCGCATTGTATCGGAAAGCCGAGCGCCGTGCTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1241675‑1241526‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcggcTTTCCGATACAATGCGACACCGTG > NC_002947/1241545‑1241568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |