| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1241526 = | 24 (0.810) | 3 (0.110) | 7/232 | NT | 12.6% | intergenic (+12/‑80) | PP_1080/grxD | molybdopterin‑binding oxidoreductase/monothiol glutaredoxin |
| ? | NC_002947 | 1241545 = | 19 (0.680) | intergenic (+31/‑61) | PP_1080/grxD | molybdopterin‑binding oxidoreductase/monothiol glutaredoxin | |||||
CTGGCGCAACCCGGCGTGAGTGCCAATGACCTGACCGATGAGCGCTTTCGGGACCAGGTTTCCGGAAACGCTGCGCTCAATGGCGTACCCGTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGATATCATCGAAACGATCAAAGAGCAGATTGCCAACAACACCATTCTGCTTTACATGAAAGGCTCGC > NC_002947/1241404‑1241675 | cTGGCGCAACCCGGCGTGAGTGCCAATGACCTGACCGATGAGCGCTTTCGGGACCAGGTTTCCGGAAACGCTGCGCTCAATGGCGTACCCGTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATa > 2:482562/1‑150 (MQ=255) gcAACCCGGCGTGAGTGCCAATGACCTGACCGATGAGCGCTTTCGGGACCAGGTTTCCGGAAACGCTGCGCTCAATGGCGTACCCGTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATg > 2:709729/1‑150 (MQ=255) aCCCGGCGTAAGGGGCAATGACCTGACCGATGAGCGCTTTCGGGACCAGGTTTCCGGAAACGCTGCGCTCAATGGCGTACCCGTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGa < 2:335652/150‑1 (MQ=255) tggtgttgttggcaatctgctctttgatcgtttcgatgatatccatgtagcacctcggctgaactatccgacacagtcgtcggcacggtgtcgcattgtatcggaaagccgagcacggcgctcggcTTTCCGATACAATGCGACACCGTg < 1:286677‑M2/24‑1 (MQ=255) tgacctgaccGATGAGCGCTTTCGGGACCAGGTTTCCGGAAACGCTGCGCTCAATGGCGTACCCGTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACtgt < 1:279579/150‑1 (MQ=255) gcaatctgctctttgatcgtttcgatgatatccatgtagcacctcggctgaactatccgacacagtcgtcggcacggtgtcgcattgtatcggaaagccgagcacggcgctcggcTTTc < 2:603961‑M2/4‑1 (MQ=255) gcaatctgctctttgatcgtttcgatgatatccatgtagcacctcggctgaactatccgacacagtcgtcggcacggtgtcgcattgtatcggaaagccgagcacggcgctcggcTTTc > 1:603961‑M2/116‑119 (MQ=255) cctgaccGATGAGCGCTTTCGGGACCAGGTTTCCGGAAACGCTGCGCTCAATGGCGTACCCGTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTc < 1:482562/150‑1 (MQ=255) ccGATGAGCGCTTTCGGGACCAGGTTTCCGGAAACGCTGCGCTCAATGGAGTACCCGTGCAGGCTGAGTGCTCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATa < 1:412817/150‑1 (MQ=255) aGCGCTTTCGGGACCAGGTTTCCGGAAACGCTGCGCTCAATGGCGTACCCGTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAg < 1:784401/150‑1 (MQ=255) tttCGGGACCAGGTTTCCGGAAACGCTGCGGTGAATGGGGTACCCGTGCAGGTCGAGGCGTCTGGACGTGGGTCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAg < 1:412979/150‑1 (MQ=255) ttCGGGACCAGGTTTCCGGAAACGCTGCGGTCAATGGCGTACCCGTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAgg < 1:400039/150‑1 (MQ=255) atccatgtagcacctcggctgaactatccgacacagtcgtcggcacggtgtcgcattgtatcggaaggccgagcacggcgctcggcTTTc < 2:395045‑M2/4‑1 (MQ=255) atccatgtagcacctcggctgaactatccgacacagtcgtcggcacggtgtcgcattgtatcggaaggccgagcacggcgctcggcTTTc > 1:395045‑M2/87‑90 (MQ=255) atgtagcacctcggctgaactatccgacacagtcgtcggcacggtgtcgcattgtatcggaaagccgagcacggcgctcggcTTTCCGa < 2:294921‑M2/7‑1 (MQ=255) atgtagcacctcggctgaactatccgacacagtcgtcggcacggtgtcgcattgtatcggaaagccgagcacggcgctcggcTTTCCGa > 1:294921‑M2/83‑89 (MQ=255) tGCGCTCAATGGCGTACCCGTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGc < 2:2630/120‑1 (MQ=255) tGCGCTCAATGGCGTACCCGTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGc > 1:2630/1‑120 (MQ=255) tCAATGGCGTACCCGTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGATATCATCGAAACGATCaaa < 2:578316/150‑1 (MQ=255) gTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGGGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGATATCATCGAAACGATCAAAGAGCAGATTGCcaa < 1:5638/150‑1 (MQ=255) gTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGat < 1:289888/112‑1 (MQ=255) gTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGat > 2:289888/1‑112 (MQ=255) cacggtgtcgcattgtatcggaaaGCCGAGCGCCGTGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGATATCATCGAAACGATCAAAGAGCAGATTGCCAACAACACCa < 1:286677‑M1/126‑1 (MQ=255) gCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATCCAATGTGATACCAGACCAACAACCTGGTCGGATAGTTCAGCCGAGGTGCTACATGGATATCATCGAAACGATCAAAGAGCAGATTGCCAACAACACCATTCt < 1:412936/150‑1 (MQ=255) gCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGAATGTGTCGGATAGTTCAGACGAGGTGCTACATGGATATCATCGAAACGATCAAAGAGCAGATTGACAACAAAACAATTATgat > 2:289353/1‑148 (MQ=255) aGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGATATCATCGAAACGATCAAAGAGCAGATTGCCAACAACACCATTCTGCTTTACa > 2:85433/1‑150 (MQ=255) tcggaaaGCCGAGCGCCGTGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACAt < 2:294921‑M1/82‑1 (MQ=255) tcggaaaGCCGAGCGCCGTGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACAt > 1:294921‑M1/8‑89 (MQ=255) gaaaGCCGAGCGCCGTGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGATATCATCGAAACGATCAAAGAGCAGATTGc > 1:603961‑M1/5‑119 (MQ=255) gaaaGCCGAGCGCCGTGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGATATCATCGAAACGATCAAAGAGCAGATTGc < 2:603961‑M1/115‑1 (MQ=255) gaaaGCCGAGCGCCGTGCTCGGCCTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGat < 2:395045‑M1/86‑1 (MQ=255) gaaaGCCGAGCGCCGTGCTCGGCCTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGat > 1:395045‑M1/5‑90 (MQ=255) aaGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGATATCATCGAAACGATCAAAGAGCAGATTGCCAACAACACCATTCTGCTTTACATGAAAGGCt > 1:747864/1‑150 (MQ=255) GCCGAGCGCCGTGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGATATCATCGAAACGATCAAAGAGCAGATTGCCAACAACACCATTCTGCTTTACATGAAAGGCTCGc > 2:286677‑M1/1‑150 (MQ=255) GCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGa > 2:177783‑M1/1‑60 (MQ=255) GCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGa < 1:177783‑M1/60‑1 (MQ=255) | CTGGCGCAACCCGGCGTGAGTGCCAATGACCTGACCGATGAGCGCTTTCGGGACCAGGTTTCCGGAAACGCTGCGCTCAATGGCGTACCCGTGCAGGTCGAGGCCGCTTGAGGAACGGCAAGGCCGAGCACGGCGCTCGGCTTTCCGATACAATGCGACACCGTGCCGACGACTGTGTCGGATAGTTCAGCCGAGGTGCTACATGGATATCATCGAAACGATCAAAGAGCAGATTGCCAACAACACCATTCTGCTTTACATGAAAGGCTCGC > NC_002947/1241404‑1241675 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |