New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 2483907 = | 22 (0.740) | 4 (0.140) | 4/232 | NT | 15.8% | coding (730/1347 nt) | puuA‑I | glutamate‑putrescine ligase |
? | NC_002947 | 2483936 = | 22 (0.790) | coding (759/1347 nt) | puuA‑I | glutamate‑putrescine ligase |
TCATGAAGCTGGCACGGTAGCCGTGCTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2483937‑2483907 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcatGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAA > NC_002947/2483936‑2484010 TCATGAAGCTGGCACGGTAGCCGTGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCTGGCAATAA < 2:428881/106‑1 TCATGAAGCTGGCACGGTAGCCGTGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAA > 1:428881/1‑106 TGAAGCTGGCACGGTAGCCGTGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGG > 1:371544/1‑97 TGAAGCTGGCACGGTAGCCGTGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGG < 2:371544/97‑1 TCATGAAGCTGGCACGGTAGCCGTGCTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2483937‑2483907 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcatGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAA > NC_002947/2483936‑2484010 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |