New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2483907 =22 (0.740)4 (0.140) 4/232 NT 15.8% coding (730/1347 nt) puuA‑I glutamate‑putrescine ligase
?NC_002947 2483936 = 22 (0.790)coding (759/1347 nt) puuA‑I glutamate‑putrescine ligase

TCATGAAGCTGGCACGGTAGCCGTGCTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2483937‑2483907
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcatGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAA  >  NC_002947/2483936‑2484010
                                                                                                          
TCATGAAGCTGGCACGGTAGCCGTGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCTGGCAATAA  <  2:428881/106‑1
TCATGAAGCTGGCACGGTAGCCGTGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAA  >  1:428881/1‑106
   TGAAGCTGGCACGGTAGCCGTGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGG        >  1:371544/1‑97
   TGAAGCTGGCACGGTAGCCGTGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGG        <  2:371544/97‑1
                                                                                                          
TCATGAAGCTGGCACGGTAGCCGTGCTTCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2483937‑2483907
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttcatGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAA  >  NC_002947/2483936‑2484010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.