| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2483907 = | 22 (0.740) | 4 (0.140) | 4/232 | NT | 15.8% | coding (730/1347 nt) | puuA‑I | glutamate‑putrescine ligase |
| ? | NC_002947 | 2483936 = | 22 (0.790) | coding (759/1347 nt) | puuA‑I | glutamate‑putrescine ligase | |||||
GAACGTCATCACCGCAGAGCTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTGCGCCATGCGGTGG > NC_002947/2483786‑2484054 | gAACGTCATCACCGCAGAGCTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGt < 1:564900/139‑1 (MQ=255)gAACGTCATCACCGCAGAGCTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGt > 2:564900/1‑139 (MQ=255)gAACGTCATCACCGCAGAGCTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCAt > 2:332206/1‑150 (MQ=255) tcaCCGCAGAGCTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAAc < 1:332206/150‑1 (MQ=255) agCTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTgg > 1:586351/1‑150 (MQ=255) cTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGAc > 1:639033/1‑150 (MQ=255) gCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACgcgc < 2:273883/150‑1 (MQ=255) ccAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCa > 2:776558/1‑150 (MQ=255) ccAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAg < 1:267245/150‑1 (MQ=255) aCTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTg < 2:648866/122‑1 (MQ=255) aCTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTg > 1:648866/1‑122 (MQ=255) ttattgccggcggcgtcgtacaggctgacgtgcacatgcatgccgctgcctggcgcgtccaggtagggtttgctcATGAAGCACGGCTACCGTGCCAGCTTCATGa > 1:428881‑M1/76‑106 (MQ=255) ttattgccagcggcgtcgtacaggctgacgtgcacatgcatgccgctgcctggcgcgtccaggtagggtttgctcATGAAGCACGGCTACCGTGCCAGCTTCATGa < 2:428881‑M1/31‑1 (MQ=255) ccggcggcgtcgtacaggctgacgtgcacatgcatgccgctgcctggcgcgtccaggtagggtttgctcATGAAGCACGGCTACCGTGCCAGCTTCa > 1:371544‑M1/70‑97 (MQ=255) ccggcggcgtcgtacaggctgacgtgcacatgcatgccgctgcctggcgcgtccaggtagggtttgctcATGAAGCACGGCTACCGTGCCAGCTTCa < 2:371544‑M1/28‑1 (MQ=255) cgaTGCCCTCAGTGCGGCGGAATGGTCGGCACTGTTCTGCCGCAGTAACCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTacga < 2:168452/150‑1 (MQ=255) gaTGCCCTCAGTGCGGCGGACTGGTCGGCACTGGTCTGCCCCAACAACCGCGGAATAGAGCTGTTTCGTGTGGACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTacgac < 1:613189/150‑1 (MQ=255) tCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGccgccg > 1:491509/1‑150 (MQ=255) gTCGGCACTGTTCTGCCGTAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGc > 2:473110/1‑150 (MQ=255) tCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCg < 1:665342/150‑1 (MQ=255) ggCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAAACATACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCggg > 2:64174/1‑150 (MQ=255) cACTGTTCTGCCGCATTACCCGCGGTATCGCGATGAAGCACGTCTACCGTGCCAGCTTCATGAGCAAACCCTACATCGACGCACCAGGCAGCGCCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGaa > 1:344905/1‑150 (MQ=255) cACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGaa > 2:704930/1‑150 (MQ=255) aatGTTCTGCCGCAGTACCCGCGGTACCGCGATAAGGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTCGACGCGCCAGCCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAg < 2:344905/148‑1 (MQ=255) tGCCGCAGTCCCCGAGGTATAGGGATGAACGACGGCTATCGTGCGTGCTTCAGGAGCAAACCCGACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAg < 2:209457/150‑1 (MQ=255) ccGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTgcg > 2:81030/1‑150 (MQ=255) cgATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTGCGCCATGCGGTgg > 1:124669/1‑150 (MQ=255) | GAACGTCATCACCGCAGAGCTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTGCGCCATGCGGTGG > NC_002947/2483786‑2484054 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |