New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2483907 =22 (0.740)4 (0.140) 4/232 NT 15.8% coding (730/1347 nt) puuA‑I glutamate‑putrescine ligase
?NC_002947 2483936 = 22 (0.790)coding (759/1347 nt) puuA‑I glutamate‑putrescine ligase

TCACCGCAGAGCTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTGCGCCATGCGGTGGCAGGCTGCCTGGAACTGCTGC  >  NC_002947/2483794‑2484075
                                                                                                                                              |                                                                                                                                           
tcaCCGCAGAGCTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAAc                                                                                                                                      <  1:332206/150‑1 (MQ=255)
         agCTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTgg                                                                                                                             >  1:586351/1‑150 (MQ=255)
           cTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGAc                                                                                                                           >  1:639033/1‑150 (MQ=255)
               gCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACgcgc                                                                                                                       <  2:273883/150‑1 (MQ=255)
                 ccAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCa                                                                                                                     >  2:776558/1‑150 (MQ=255)
                      ccAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAg                                                                                                                <  1:267245/150‑1 (MQ=255)
                                    aCTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTg                                                                                                                              >  1:648866/1‑122 (MQ=255)
                                    aCTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTg                                                                                                                              <  2:648866/122‑1 (MQ=255)
                                      ttattgccggcggcgtcgtacaggctgacgtgcacatgcatgccgctgcctggcgcgtccaggtagggtttgctcATGAAGCACGGCTACCGTGCCAGCTTCATGa                                                                                                                                            >  1:428881‑M1/76‑106 (MQ=255)
                                      ttattgccagcggcgtcgtacaggctgacgtgcacatgcatgccgctgcctggcgcgtccaggtagggtttgctcATGAAGCACGGCTACCGTGCCAGCTTCATGa                                                                                                                                            <  2:428881‑M1/31‑1 (MQ=255)
                                                    cgaTGCCCTCAGTGCGGCGGAATGGTCGGCACTGTTCTGCCGCAGTAACCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTacga                                                                                  <  2:168452/150‑1 (MQ=255)
                                                     gaTGCCCTCAGTGCGGCGGACTGGTCGGCACTGGTCTGCCCCAACAACCGCGGAATAGAGCTGTTTCGTGTGGACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTacgac                                                                                 <  1:613189/150‑1 (MQ=255)
                                                            tCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGccgccg                                                                          >  1:491509/1‑150 (MQ=255)
                                                                            gTCGGCACTGTTCTGCCGTAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGc                                                          >  2:473110/1‑150 (MQ=255)
                                                                             tCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCg                                                         <  1:665342/150‑1 (MQ=255)
                                                                               ggCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAAACATACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCggg                                                       >  2:64174/1‑150 (MQ=255)
                                                                                 cACTGTTCTGCCGCATTACCCGCGGTATCGCGATGAAGCACGTCTACCGTGCCAGCTTCATGAGCAAACCCTACATCGACGCACCAGGCAGCGCCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGaa                                                     >  1:344905/1‑150 (MQ=255)
                                                                                 cACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGaa                                                     >  2:704930/1‑150 (MQ=255)
                                                                                  aatGTTCTGCCGCAGTACCCGCGGTACCGCGATAAGGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTCGACGCGCCAGCCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAg                                                    <  2:344905/148‑1 (MQ=255)
                                                                                         tGCCGCAGTCCCCGAGGTATAGGGATGAACGACGGCTATCGTGCGTGCTTCAGGAGCAAACCCGACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAg                                             <  2:209457/150‑1 (MQ=255)
                                                                                                    ccGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTgcg                                  >  2:81030/1‑150 (MQ=255)
                                                                                                               tcatgaagctggcacggtagccgtgcttcatGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCTGGCAATaa                                                                   <  2:428881‑M2/75‑1 (MQ=255)
                                                                                                               tcatgaagctggcacggtagccgtgcttcatGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATaa                                                                   >  1:428881‑M2/32‑106 (MQ=255)
                                                                                                               cgATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTGCGCCATGCGGTgg                       >  1:124669/1‑150 (MQ=255)
                                                                                                                  tgaagctggcacggtagccgtgcttcatGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCgg                                                                         <  2:371544‑M2/69‑1 (MQ=255)
                                                                                                                  tgaagctggcacggtagccgtgcttcatGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCgg                                                                         >  1:371544‑M2/29‑97 (MQ=255)
                                                                                                                        aCGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTGCGCCATGCGGTGGCAGGCTGcc              <  2:586351/150‑1 (MQ=255)
                                                                                                                         cGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTGCGCCATGCGGTGGCAGGCTGCCt             <  2:491509/150‑1 (MQ=255)
                                                                                                                                   gCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTGCGCCATGCGGTGGCAGGCTGCCTGGAActgctg   >  1:421054/1‑150 (MQ=255)
                                                                                                                                    ccAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTGCGCCATGCGGTGGCAGGCTGCCTGGAACtgctgc  <  1:81030/150‑1 (MQ=255)
                                                                                                                                    ccAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTGCGCCATGCGGTGGCAGGCTGCCTGGAACtgctgc  <  1:784296/150‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                           
TCACCGCAGAGCTGGGCCCAGGCCAGTTCGAGATCAACTTCTCGCACAGCGACGATGCCCTCAGTGCGGCGGACTGGTCGGCACTGTTCTGCCGCAGTACCCGCGGTATCGCGATGAAGCACGGCTACCGTGCCAGCTTCATGAGCAAACCCTACCTGGACGCGCCAGGCAGCGGCATGCATGTGCACGTCAGCCTGTACGACGCCGCCGGCAATAACATCCTGGCGGGAAGCGAACAGCGCAAGCTGCGCCATGCGGTGGCAGGCTGCCTGGAACTGCTGC  >  NC_002947/2483794‑2484075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.