New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2887906	29 (0.980)	4 (0.140)	4/240	NT	13.1%	coding (806/1425 nt)	PP_2542	GntR family transcriptional regulator
	?	NC_002947	= 2887947	25 (0.870)					coding (765/1425 nt)	PP_2542	GntR family transcriptional regulator

TGGAATAGCTGCCCACGTACACCACCTGCTGCAGATGGTCGAGGCTGGCCAGGCACGGCTGCGGCTCGGCGACCATGTCGGCGTACAGGTTGTTCTCCACCAGGCGGAAGCCATGCTGGCTAGCAAGCTGCAGCAGGCGGTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2887763‑2887906 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaCCTGCACAGCCCGACGTGCTCCCGCACCCCGCTGCCGCAGTTGCA  <  NC_002947/2887947‑2887903                                                                                                                                                                                               TGGAATAGCTGCCCACGTACACCACCTGCTGCAGATGGTCGAGGCTGGCCAGGCACGGCTGCGGCTCGGCGACCATGTCGGCGTACAGGTTGTTCTCCACCAGGCGGAAGCCATGCTGGCTAGCAAGCTGCAGCAGGCGGTGCACCTGCA                                         >  2:79978/1‑150                                        CGAGGCTGGCCAGGCACGGCTGCGGCTCGGCGACCATGTCGGCGTACAGGTTGTTCTCCACCAGGCGGAAGCCATGCTGGCTAGCAAGCTGCAGCAGGCGGTGCACCTGCACAGCCCGACGTGCTCCCGCACCCCGCTGCCGCAGTTGCA  <  1:79978/150‑1                                                                 CTCGGCGACCATGTCGGCGTACAGGTTGTTCTCCACCAGGCGGAAGCCATGCTGGCTAGCAAGCTGCAGCAGGCGGTGCACCTGCACAGCCCGACGTGCTCCCGCACCCCGCTGCCGCAGTT     >  1:423471/1‑122                                                                 CTCGGCGACCATGTCGGCGTACAGGTTGTTCTCCACCAGGCGGAAGCCATGCTGGCTAGCAAGCTGCAGCAGGCGGTGCACCTGCACAGCCCGACGTGCTCCCGCACCCCGCTGCCGCAGTT     <  2:423471/122‑1                                                                                                                                                                                               TGGAATAGCTGCCCACGTACACCACCTGCTGCAGATGGTCGAGGCTGGCCAGGCACGGCTGCGGCTCGGCGACCATGTCGGCGTACAGGTTGTTCTCCACCAGGCGGAAGCCATGCTGGCTAGCAAGCTGCAGCAGGCGGTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2887763‑2887906 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaCCTGCACAGCCCGACGTGCTCCCGCACCCCGCTGCCGCAGTTGCA  <  NC_002947/2887947‑2887903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.