New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3295560 =	21 (0.710)	4 (0.140)	4/232	NT	15.7%	coding (169/645 nt)	PP_2895	hypothetical protein
	?	NC_002947	3295583 =	23 (0.830)					coding (146/645 nt)	PP_2895	hypothetical protein

ACAGCCTTATAGGCTCCGTGATCAATGCCCTGCCGATGGACCGCATGATCGCCGGCCCCTTGCAGGCCATGGTGCAGGCGCAGGTAACCGCCAGCAAATCGTACGCCGATTTCCTGATGCAGGTATGCGTCCAGGATGG‑CAAGGCAGTGGCCATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3295715‑3295560 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatccTGGACGCATACCTGCATCAGGAAATCGGCGTACGATTTGCTGGCGGTTACCTGCGCCTGCACCATGGCCTGCAAGGGGCCGGCGATCATGCGGTCCATCGGCAGGGCATTGATCACGGAGCCTATAAGGCTGT  >  NC_002947/3295583‑3295715                                                                                                                                                                                                                                                                                                    ACAGCCTTATAGGCTCCGTGATCAATGCCCTGCCGATGGACCGCATGATCGCCGGCCCCTTGCAGGCCATGGTGCAGGCGCAGGTAACCGCCAGCAAATCGTACGCCGATTTCCTGATGCAGGTATGCGTCCAGGATGG‑CAAGGCAGTGG                                                                                                                                             <  1:389237/150‑1   AGCCTTATAGGCTCCGTGATCAATGCCCTGCCGATGGACCGCATGATCGCCGGCCCCTTGCAGGCCATGGTGCAGGCGCAGGTAACCGCCAGCAAATCGTACGCCGATTTCCTGATGCAGGTATGCGTCCAGGATGG‑CAAGGCAGTGGCC                                                                                                                                           >  2:559371/1‑150                               TGCCGATGGACCGCATGATCGCCGGCCCCTTGCAGGCCATGGTGCAGGCGCAGGTAACCGCCAGCAAATCGTACGCCGATTTCCTGATGCAGGTATGCGTCCAGGATGG‑CAAGGCAGTGGCCATCC                                                                                                                                       >  1:515579/1‑126                               TGCCGATGGACCGCATGATCGCCGGCCCCTTGCAGGCCATGGTGCAGGCGCAGGTAACCGCCAGCAAATCGTACGCCGATTTCCTGATGCAGGTATGCGTCCAGGATGG‑CAAGGCAGTGGCCATCC                                                                                                                                       <  2:515579/126‑1                                                   GCCGGCCCCTTGCAGGCCATGGTGCAGGCGCAGGTAACCGCCAGCAAATCGTACGCCGATTTCCTGATGCAGGTATGCGTCCTGGATGGCCACTGC‑CTTGCCATCCTGGACGCATACCTGCATCAG                                                                                                                   >  1:59724/1‑126                                                   GCCGGCCCCTTGCAGGCCATGGTGCAGGCGCAGGTAACCGCCAGCAAATCGTACGCCGATTTCCTGATGCAGGTATGCGTCCTGGATGGCCACTGC‑CTTGCCATCCTGGACGCATACCTGCATCAG                                                                                                                   <  2:59724/126‑1                                                            TTGCAGGCCATGGTGCAGGCGCAGGTAACCGCCAGCAAATCGTACGCCGATTTCCTGATGCAGGTATGCGTCCAGGATGGCCACTGC‑CTTGCCATCCTGGACGCATACCTGCATC                                                                                                                     >  1:519965/1‑115                                                            TTGCAGGCCATGGTGCAGGCGCAGGTAACCGCCAGCAAATCGTACGCCGATTTCCTGATGCAGGTATGCGTCCAGGATGGCCACTGC‑CTTGCCATCCTGGACGCATACCTGCATC                                                                                                                     <  2:519965/115‑1                                                                                                                                                        CCATCCTGGACGCATACCTGCATCAGGAAATCGGCGTACGATTTGCTGGCGGTTACCTGCGCCTGCACCATGGCCTGCAAGGGGCCGGCGATCATGCGGTCCATCGGCAGGGCATTGATCACGGAGCCTATAAGGCTGT  <  1:70085/139‑1                                                                                                                                                        CCATCCTGGACGCATACCTGCATCAGGAAATCGGCGTACGATTTGCTGGCGGTTACCTGCGCCTGCACCATGGCCTGCAAGGGGCCGGCGATCATGCGGTCCATCGGCAGGGCATTGATCACGGAGCCTATAAGGCTGT  >  2:70085/1‑139                                                                                                                                                                                                                                                                                                    ACAGCCTTATAGGCTCCGTGATCAATGCCCTGCCGATGGACCGCATGATCGCCGGCCCCTTGCAGGCCATGGTGCAGGCGCAGGTAACCGCCAGCAAATCGTACGCCGATTTCCTGATGCAGGTATGCGTCCAGGATGG‑CAAGGCAGTGGCCATCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3295715‑3295560 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccatccTGGACGCATACCTGCATCAGGAAATCGGCGTACGATTTGCTGGCGGTTACCTGCGCCTGCACCATGGCCTGCAAGGGGCCGGCGATCATGCGGTCCATCGGCAGGGCATTGATCACGGAGCCTATAAGGCTGT  >  NC_002947/3295583‑3295715

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.