| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3794011 = | 29 (0.980) | 4 (0.140) | 4/230 | NT | 12.1% | coding (555/1191 nt) | PP_3355 | beta‑ketothiolase |
| ? | NC_002947 | 3794035 = | 31 (1.120) | coding (531/1191 nt) | PP_3355 | beta‑ketothiolase | |||||
CTTTCTCTGGGAAGCCCTGTACGACCCGGCTGCCGGCGTGGACATGATCGGTACTGCGGAAAACCTGGCCCGTGCCTATGGCCTGGCGCGTGAAACGGTGGACGCGTGGGCCCTGCGCAGCCATCAGCGGGCCCTGCAAGCCCAGG‑‑TGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3794164‑3794011‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagggcCCGCTGATGGCTGCGCAGGGCCCACGCGTCCACCGTTTCACGCGCCAGGCCATAGGCACGGGCCAGGTTTTCCGCAGTACCGATCATGTCCACGCCGGCAGCCGGGTCGTACAGGGCTTCCCAGAGAAAGTCCTTGAACCCGACCGGCG > NC_002947/3794035‑3794183 CTTTCTCTGGGAAGCCCTGTACGACCCGGCTGCCGGCGTGGACATGATCGGTACTGCGGAAAACCTGGCCCGTGCCTATGGCCTGGCGCGTGAAACGGTGGACGCGTGGGCCCTGCGCAGCCATCAGCGGGCCCTGCAAGCCCAGG‑‑TGCA < 2:694747/150‑1 TTTCTCTGGGAAGCCCTGTACGACCCGGCTTCCGGCGTGGACATGATCGGTACTGCGGAAAACCTGGCCCGTGCCTATGGCCTGGCGCGTGAAACGGTGGACGCGTGGGCCCTGCGCAGCCATCAGCGGGCCCTGCAAGCCCAGG‑‑TGCAG > 1:544055/1‑150 TTTCTCTGGGAAGCCCTGTACGACCCGGCTGCCGGCGTGGACATGATCGGTACTGCGGAAAACCTGGCCCGTGCCTATGGCCTGGCGCGTGAAACGGTGGACGCGTGGGCCCTGCGCAGCCATCAGCGGGCCCTGCAAGCCCAGG‑‑TGCAG < 2:30550/150‑1 GTACTGCGGAAAACCTGGCCCGTGCCTATGGCCTGGCGCGTGAAACGGTGGACGCGTGGGCCCTGCGCAGCCATCAGCGGGCCCTGCA‑‑CCTGGGCTTGCAGGGCCCGCTGATGGCTGCGCA < 1:597211/121‑1 GTACTGCGGAAAACCTGGCCCGTGCCTATGGCCTGGCGCGTGAAACGGTGGACGCGTGGGCCCTGCGCAGCCATCAGCGGGCCCTGCA‑‑CCTGGGCTTGCAGGGCCCGCTGATGGCTGCGCA > 2:597211/1‑121 GAAAACCTGGCCCGTGCCTATGGCCTGGCGCGTGAAACGGTGGACGCGTGGGCCCTGCGCAGCCATCAGCGGGCCCTGCAAGCCCAGG‑‑TGCAGGG > 1:450502/1‑95 GAAAACCTGGCCCGTGCCTATGGCCTGGCGCGTGAAACGGTGGACGCGTGGGCCCTGCGCAGCCATCAGCGGGCCCTGCAAGCCCAGG‑‑TGCAGGG < 2:450502/95‑1 TCAGCGGGCCCTGCAAGCCCAGG‑‑TGCAGGGCCCGCTGATGGCTGCGCAGGGCCCACGCGTCCACCGTTTCACGCGCCAGGCCATAGGCACGGGCCA < 1:342480/96‑1 TCAGCGGGCCCTGCAAGCCCAGG‑‑TGCAGGGCCCGCTGATGGCTGCGCAGGGCCCACGCGTCCACCGTTTCACGCGCCAGGCCATAGGCACGGGCCA > 2:342480/1‑96 CAGGGCCCGCTGATGGCTGCGCAGGGCCCACGCGTCCACCGTTTCACGCGCCAGGCCATAGGCACGG < 1:279385/67‑1 CAGGGCCCGCTGATGGCTGCGCAGGGCCCACGCGTCCACCGTTTCACGCGCCAGGCCATAGGCACGG > 2:279385/1‑67 CCCGCTGATGGCTGCGCAGGGCCCACGCGTCCACCGTTTCACGCGCCAGGCCATAGGCACGGGCCAGGTTTTCCGCAGTACCGATCATGTCCACGCCGGCAGCCGGGTCGTACAGGGCTTCCCAGAGAAAGTCCTTGAACCCGACCGGCG > 1:204909/1‑150 CTTTCTCTGGGAAGCCCTGTACGACCCGGCTGCCGGCGTGGACATGATCGGTACTGCGGAAAACCTGGCCCGTGCCTATGGCCTGGCGCGTGAAACGGTGGACGCGTGGGCCCTGCGCAGCCATCAGCGGGCCCTGCAAGCCCAGG‑‑TGCAGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3794164‑3794011‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcagggcCCGCTGATGGCTGCGCAGGGCCCACGCGTCCACCGTTTCACGCGCCAGGCCATAGGCACGGGCCAGGTTTTCCGCAGTACCGATCATGTCCACGCCGGCAGCCGGGTCGTACAGGGCTTCCCAGAGAAAGTCCTTGAACCCGACCGGCG > NC_002947/3794035‑3794183 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |