New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3933475 =	19 (0.640)	5 (0.180)	4/232	NT	23.3%	coding (46/1710 nt)	PP_3466	ABC transporter permease/ATP‑binding protein
	?	NC_002947	3933493 =	15 (0.540)					coding (28/1710 nt)	PP_3466	ABC transporter permease/ATP‑binding protein

AGGGCAACGTCTCGGCCGCCGCCGCGGCACTGGGTATCAGCCGGGCGACGCTGTACCGCAAGCTCAAGCAGTTGCGCGGCTGACGTGGGCGGCCTGTTCGCAAGGCTGGTGGATTCCAGCGACCCTGTACTCATGCGCCAGGCGTTGGCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3933628‑3933475 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggcGCATGAGTACAGGGTCGCTGGAATCCACCAGCCTTGCGAACAGGCCGCCCACGTCAGCCGCGCAACTGCTTGAGCTTGCGGTACAGCGTCGCCCGGCTGATACCCAGTGCCGCGGCGGCGGCCGAGACGTTGCCCTGATGGCG  >  NC_002947/3933493‑3933635                                                                                                                                                                                                                                                                                                           AGGGCAACGTCTCGGCCGCCGCCGCGGCACTGGGTATCAGCCGGGCGACGCTGTACCGCAAGCTCAAGCAGTTGCGCGGCTGACGTGGGCGGCCTGTTCGCAAGGCTGGTGGATTCCAGCGACCCTGTACTCATGCGCCAGGCGTTGGCC                                                                                                                                                     >  2:190416/1‑150     caccaTCTCGGCCGCCGCCGCGGCACTGGGTATCAGCCGGGCGACGCTGTACCGCAAGCTCAAGCAGTTGCGCGGCTGACGTGGGCGGCCTGTTCGCAAGGCTGGTGGATTCCAGCGACCCTGTACTCATGCGCCAGGCGTTGGCCTGGC                                                                                                                                                 <  1:410499/145‑1                        GCGGCACTGGGTATCAGCCGGGCGACGCTGTACCGCAAGCTCAAGCAGTTGCGCGGCTGACGTGGGCGGCCTGTTCGCAAGGCTGGTGGATTCCAGCGACCCTGTACTCATGCGCCAGGCCAACGCCTGGCGCATGAGTACAGGGTCGCT                                                                                                                              >  1:95671/1‑150                            CACTGGGTATCAGCCGGGCGACGCTGTACCGCAAGCTCAAGCAGTTGCGCGGCTGACGTGGGCGGCCTGTTCGCAAGGCTGGTGGATTCCAGCGACCCTGTACTCATGCGCCAGGCCAACGCCTGGCGCATGAGTACAGGGTCGCTGGAA                                                                                                                          <  2:95671/150‑1                                                                                                                                     ATGCGCCAGGCGTTGGCCTGGCGCATGAGTACAGGGTCGCTGGAATCCACCAGCCTTGCGAACAGGCCGCCCACGTCAGCCGCGCAACTGCTTGAGCTTGCGGTACAGCGTCGCCCGGCTGATACCCAGTGCCGCGGCGGCGGCCGAGAC                 >  2:755570/1‑150                                                                                                                                     ATGCGCCAGGCGTTGGCCTGGCACATGAGTACAGGGTCGCTG                                                                                                                             <  1:379659/42‑1                                                                                                                                     ATGCGCCAGGCGTTGGCCTGGCACATGAGTACAGGGTCGCTG                                                                                                                             >  2:379659/1‑42                                                                                                                                                    GCCTGGCGCATGAGTACAGGGTCGCTAGATTCGACCAGCCTTGCGAACAGGCCGCCCACGTCAGCCGCGCAACTGCTTGAGCTTGCGGTACAGCGTCGCCCGGCTGATACCCAGTGCCGCGGCGGCGGCCGAGACGTTGCCCTGATGGCG  >  1:744080/1‑150                                                                                                                                                        GGCGCATGAGTACAGGGTCGCTGGAATCCACCAGCCTTGCGAACAGGCCGCCCACGTCAGCCGCGCAACTGCTTGAGCTTGCGGTACAGCGTCGCCCGGCTGATACCCAGTGCCGCGGCGGCGGCCGAGACGTTGCCCTGAT      <  1:425362/142‑1                                                                                                                                                        GGCGCATGAGTACAGGGTCGCTGGAATCCACCAGCCTTGCGAACAGGCCGCCCACGTCAGCCGCGCAACTGCTTGAGCTTGCGGTACAGCGTCGCCCGGCTGATACCCAGTGCCGCGGCGGCGGCCGAGACGTTGCCCTGAT      >  2:425362/1‑142                                                                                                                                                                                                                                                                                                           AGGGCAACGTCTCGGCCGCCGCCGCGGCACTGGGTATCAGCCGGGCGACGCTGTACCGCAAGCTCAAGCAGTTGCGCGGCTGACGTGGGCGGCCTGTTCGCAAGGCTGGTGGATTCCAGCGACCCTGTACTCATGCGCCAGGCGTTGGCCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3933628‑3933475 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcctggcGCATGAGTACAGGGTCGCTGGAATCCACCAGCCTTGCGAACAGGCCGCCCACGTCAGCCGCGCAACTGCTTGAGCTTGCGGTACAGCGTCGCCCGGCTGATACCCAGTGCCGCGGCGGCGGCCGAGACGTTGCCCTGATGGCG  >  NC_002947/3933493‑3933635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.