New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4471262	32 (1.080)	3 (0.110)	3/236	NT	8.5%	intergenic (‑29/‑865)	PP_3961/PP_3962	transporter/hypothetical protein
	?	NC_002947	= 4471274	34 (1.200)					intergenic (‑41/‑853)	PP_3961/PP_3962	transporter/hypothetical protein

GAGACAACATGGTGATGATCCCGATACCGGTCATCGGCAACGGCAGCCGGGCCAGCAGGCCGGCCAAGGCGAAGCCCTTGGCGCCTTTGGCCTGGAACAACTCGCGGTAGGTACTGAACACGCTCGACTCTCCTTATCGAAAGGCCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4471113‑4471262 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgAGC‑GTGACTGCCCAAGGGCCTTTCGATAAGGAGAGTCGAGCGTGTTCAGTACCTACCGCGAGTTGTTCCAGGCCAAAGGCGCCAAGGGCTTCGCCTTGGCCGGCCTGCTGGCCCGGCTGCCGTTGCCGATGACCGGTATCGGGATC  <  NC_002947/4471274‑4471129                                                                                                                                                                                                                                                                                                           GAGACAACATGGTGATGATCCCGATACCGGTCATCGGCAACGGCAGCCGGGCCAGCAGGCCGGCCAAGGCGAAGCCCTTGGCGCCTTTGGCCTGGAACAACTCGCGGTAGGTACTGAACACGCTCGACTCTCCTTATCGAAAGGCCCTTG                                                                                                                                                     >  1:704832/1‑150                                                                                                                  CTGAACACGCTCGACTCTCCTTATCGAAAGGCCCTTGGGCAGTCAC‑GCTCAAGGGCCTTTCGATAAGGAGAGTCGAGCGTGTTCAGTACCTACCGCGAGTTGTTCCAGGCCAAAGGCGCCAAGGGCTTCGCCTTGGCCGGCCTGCTGGCC                                   >  1:768797/1‑150                                                                                                                                      TTATCGAAAGGCCCTTGGGCAGTCAC‑GCTCAAGGGCCTTTCGATAAGGAGAGTCGAGCGTGTTCAGTACCTACCGCGAGTTGTTCCAGGCCAAA                                                                       >  1:497719/1‑94                                                                                                                                      TTATCGAAAGGCCCTTGGGCAGTCAC‑GCTCAAGGGCCTTTCGATAAGGAGAGTCGAGCGTGTTCAGTACCTACCGCGAGTTGTTCCAGGCCAAA                                                                       <  2:497719/94‑1                                                                                                                                                   CTTGAGC‑GTGACTGCCCAAGGGCCTTTCGATAAGGAGAGTCGAGCGTGTTCAGTACCTACCGCGAGTTGTTCCAGGCCAAAGGCGCCAAGGGCTTCGCCTTGGCCGGCCTGCTGGCCCGGCTGCCGTTGCCGATGACCGGTATCGGGATC  <  1:263818/150‑1                                                                                                                                                                                                                                                                                                           GAGACAACATGGTGATGATCCCGATACCGGTCATCGGCAACGGCAGCCGGGCCAGCAGGCCGGCCAAGGCGAAGCCCTTGGCGCCTTTGGCCTGGAACAACTCGCGGTAGGTACTGAACACGCTCGACTCTCCTTATCGAAAGGCCCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4471113‑4471262 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccttgAGC‑GTGACTGCCCAAGGGCCTTTCGATAAGGAGAGTCGAGCGTGTTCAGTACCTACCGCGAGTTGTTCCAGGCCAAAGGCGCCAAGGGCTTCGCCTTGGCCGGCCTGCTGGCCCGGCTGCCGTTGCCGATGACCGGTATCGGGATC  <  NC_002947/4471274‑4471129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.