| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4672421 | 43 (1.460) | 3 (0.110) | 3/232 | NT | 6.9% | coding (34/363 nt) | PP_4134 | membrane protein |
| ? | NC_002947 | = 4672447 | 41 (1.470) | coding (8/363 nt) coding (348/348 nt) |
PP_4134 PP_4135 |
membrane protein hypothetical protein |
|||||
GCGCCTGGCCTCACTGGTGATCAATCGATCGCGTGCCGCGCTCACCAACAGTGCTCCCAGCAGCGCGGCGAACAGGACATCGCCATCCACACCCAGGAACGCCACCAATGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4672308‑4672421‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcctgAGCTATCAGTTTTTGACAACCTGGCCCAGGCATTGGTGGCGTTCCTGGGTGTGGATGGCGATGTCCTGTTCGCCGCGCTGCTGGGAGCACTGTTGGTGAGCGCGGCACGCGATCGATTGATCACCAGTGAGGCCAGGCGCCTGACACTG < NC_002947/4672447‑4672299 GCGCCTGGCCTCACTGGTGATCAATCGATCGCGTGCCGCGCTAACCAACAGTGCTCCCAGCAGCGCGGCGAACAGGACATCGCCATCCACACCCAGGAACGCCACCAATGCCTGAGCTATCAGTTTTTGACAACCTGGCCCAGGCATTG > 1:217615/1‑149GCGCCTGGCCTCACTGGTGATCAATCGATCGCGTGCCGCGCTAACCAACAGTGCTCCCAGCAGCGCGGCGAACAGGACATCGCCATCCACACCCAGGAACGCCACCAATGCCTGAGCTATCAGTTTTTGACAACCTGGCCCAGGCATTG < 2:217615/149‑1 GCCTGGCCTCACTGGTGATCAATCGATCGCGTGCCGCGCTCACCAACAGTGCTCCCAGCAGCGCGGCGAACAGGACATCGCCATCCACACCCAGGAACGCCACCAATGCCTGAGCTATCAGTTTTTGACAACCTGGCCCAGGCATTGGTG < 1:435733/150‑1 ATGCCTGAGCTATCAGTTTTTGACAACCTGGCCCAGGCATTGGTGGCGTTCCTGGGTGTGGATGGCGATGTCCTGTTCGCCGCGCTGCTGGGAGCACTGTTGGTGAGCGCGGCACGCGATCGATTGATCACCAGTGAGGCCAGGCGCCTG > 2:394173/1‑150 CCTGAGCTATCAGTTTTTGACAACCTGGCCCAGGCATTGGTGACGTTCCTGGGCGTGGATGGCGATGTCCTGTTCGCCGCGCTGCTGGGAGAACTGTTGGTGAGCGCGGGACGCGCTCTATTGATCACCAGTGAGGCCAGGCGCCTGACA > 2:103704/1‑150 TGAGCTATCAGTTTTTGACAACCTGGCCCAGGCATTGGTGGCGTTCCTGGGTGTGGATGGCGATGTCCTGTTCGCCGCGCTGCTGGGAGCACTGTTGGTGAGCGCGGCACGCGATCGATTGATCACCAGTGAGGCCAGGCGCCTGACACT < 1:759150/150‑1 GAGCTATCAGTTTTTGACAACCTGGCCCAGGCATTGGTGGCGTTCCTGGGTGTGGATGGCGATGTCCTGTTCGCCGCGCTGCTGGGAGCACTGTTGGTGAGCGCGGCACGCGATCGATTGATCACCAGTGAGGCCAGGCGCCTGACACTG > 1:482639/1‑150 GCGCCTGGCCTCACTGGTGATCAATCGATCGCGTGCCGCGCTCACCAACAGTGCTCCCAGCAGCGCGGCGAACAGGACATCGCCATCCACACCCAGGAACGCCACCAATGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4672308‑4672421‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcctgAGCTATCAGTTTTTGACAACCTGGCCCAGGCATTGGTGGCGTTCCTGGGTGTGGATGGCGATGTCCTGTTCGCCGCGCTGCTGGGAGCACTGTTGGTGAGCGCGGCACGCGATCGATTGATCACCAGTGAGGCCAGGCGCCTGACACTG < NC_002947/4672447‑4672299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |