New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4987256	38 (1.290)	4 (0.140)	4/244	NT	10.4%	coding (169/468 nt)	PP_4396	hypothetical protein
	?	NC_002947	= 4987290	31 (1.060)					coding (203/468 nt)	PP_4396	hypothetical protein

CAAGGAAGCAATCGCCCTGCATGGCCGCGACATGCCGCTGCTGGAGCAAATCCTGGCGCGCAAGCAGTCGTTGATCATCTTGCTCGAGCAGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4987162‑4987256 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCCCAGGCTGCCGAGCAATTGGCTGCGGCGCTGGCCATGCTGCTCGAGCAAGATGA  <  NC_002947/4987290‑4987236                                                                                                                                                        CAAGGAAGCAATCGCCCTGCATGGCCGCGACATGCCGCTGCTGGAGCAAATCCTGGCGCGCAAGCAGTCGTTGATCATCTTGCTCGAGCAGCATGCCCAGGCTGCCGAGCAATTGGCTGCGGCGCTGGCCATGCTGCTCGAGCAAGATGA  <  1:172085/150‑1 CAAGGAAGCAATCGCCCTGCATGGCCGCGACATGCCGCTGCTGGAGCAAATCCTGGCGCGCAAGCAGTCGTTGATCATCTTGCTCGAGCAGCATGCCCAGGCTGCCGAGAAATTGGCTGCGACGCAAGCTATGCCGCGCTAGCAAGATGA  >  2:172085/1‑150                                               CAAATCCTGGCGCGCAAGCAGTCGTTGATCATCTTGCTCGAGCAGCATGCCCAGGCTGCCGAGCAATTGGCTGCGGCGCTGGCCATG                   <  1:629719/87‑1                                               CAAATCCTGGCGCGCAAGCAGTCGTTGATCATCTTGCTCGAGCAGCATGCCCAGGCTGCCGAGCAATTGGCTGCGGCGCTGGCCATG                   >  2:629719/1‑87                                                                                                                                                        CAAGGAAGCAATCGCCCTGCATGGCCGCGACATGCCGCTGCTGGAGCAAATCCTGGCGCGCAAGCAGTCGTTGATCATCTTGCTCGAGCAGCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4987162‑4987256 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCCCAGGCTGCCGAGCAATTGGCTGCGGCGCTGGCCATGCTGCTCGAGCAAGATGA  <  NC_002947/4987290‑4987236

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.