New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5159824	25 (0.850)	9 (0.410)	7/184	NT	27.8%	intergenic (+39/+67)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein
	?	NC_002947	= 5159839	28 (1.270)					intergenic (+54/+52)	PP_4542/PP_4543	ABC transporter ATP‑binding protein/permease/hypothetical protein

GGACCGGCTGGTGGTGCTGGACAAGGGGCGAATTGTCGAGAGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5159656‑5159824 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccttttcgcgggtaaacccgctcctacaACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTCCAGCAACTCACTGTGGCTGCCACTCTCG  <  NC_002947/5159839‑5159692                                                                                                                                                                                                                                                                                                                               GGACCGGCTGGTGGTGCTGGACAAGGGGCGAATTGTCGAGAGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGC                                                                                                                                                                         >  1:258951/1‑150   ACCGGCTGGTGGTGCTGGACAAGGGGCGAATTGTCGAGAGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGG                                                                                                                                                                       <  2:83450/150‑1   ACCGGCTGGTGGTGCTGGACAAGGGGCGAATTGTCGAGAGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGG                                                                                                                                                                       >  1:477348/1‑150    CCGGCTGGTGGTGCTGGACAAGGGGCGAATTGTCGAGAGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGG                                                                                                                                                                       <  2:10576/149‑1    CCGGCTGGTGGTGCTGGACAAGGGGCGAATTGTCGAGAGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGG                                                                                                                                                                       >  1:10576/1‑149                                       AGAGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTA                                                                                                                                   <  2:154679/150‑1                                          GTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAGGA                                                                                                                                <  2:477348/150‑1                                              CAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGG                                                                                                                            <  2:211030/150‑1                                                                              TGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAG                                                                                                                                  >  1:502145/1‑112                                                                              TGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAG                                                                                                                                  <  2:502145/112‑1                                                                                              GCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGG                                                                                                                            >  2:143043/1‑102                                                                                              GCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTGTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGG                                                                                                                            <  1:143043/102‑1                                                                                                               GTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTA                                                                                                                                   >  2:143271/1‑78                                                                                                               GTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTA                                                                                                                                   <  1:143271/78‑1                                                                                                                                            GGCCTTTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTC                              <  2:782100/150‑1                                                                                                                                            GGCCTTTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTC                              >  1:782100/1‑150                                                                                                                                              CCTTTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTCCA                            >  2:303667/1‑150                                                                                                                                                TTTTCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTCCAGC                          >  1:34824/1‑150                                                                                                                                                   TCGCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTCCAGCAAC                       <  2:451853/150‑1                                                                                                                                                     GCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAAC                                                                            <  2:262432/95‑1                                                                                                                                                     GCGGGTAAACCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAAC                                                                            >  1:262432/1‑95                                                                                                                                                              CCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTCCAGCAACTCACTGTGGCT            >  2:614049/1‑150                                                                                                                                                              CCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGC                                >  1:72349/1‑130                                                                                                                                                              CCCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGC                                <  2:72349/130‑1                                                                                                                                                               CCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTCCAGCAACTCACTGTGGCTG           >  1:610184/1‑150                                                                                                                                                               CCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTCCAGCAACTCACTGTGGCTG           >  2:780461/1‑150                                                                                                                                                               CCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCC                                        <  2:151586/121‑1                                                                                                                                                               CCGCTCCTACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCC                                        >  1:151586/1‑121                                                                                                                                                                    CCTACAACGATATCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAATCGGGCANACAGCCCTTGCTGCTCCAGCAACTCACTGTGGCTGCCACT      <  1:537465/150‑1                                                                                                                                                                       ACAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTCCAGCAACTCACTGTGGCTGCCACTCTC   <  1:780461/150‑1                                                                                                                                                                        CAACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGAGGAGCCACACCCTCCGATACAGCCCTTGCTGCGCCAGCAACTCACTGTGGCTGCCACTCTCG  <  1:614049/150‑1                                                                                                                                                                         AACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTCCAGCAACTCACTGTGGCTGCCA        <  1:751113/143‑1                                                                                                                                                                         AACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTCCAGCAACTCACTGTGGCTGCCA        >  2:751113/1‑143                                                                                                                                                                                                                                                                                                                               GGACCGGCTGGTGGTGCTGGACAAGGGGCGAATTGTCGAGAGTGGCAGCCACAGTGAGTTGCTGGAGCAGCAAGGGCTGTATGCCCGGTTGTGGCACCACCAGACCGGAGGTTTTGTCGGGGTCGATTGACACCTGCGCGGCCTTTTCGCGGGTAAACCCGCTCCTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5159656‑5159824 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggccttttcgcgggtaaacccgctcctacaACGATAGCGAACCTGTGTAGGAGCGGGTTTACCCGCGAAAAGGCCGCGCAGGTGTCAATCGACCCCGACAAAACCTCCGGTCTGGTGGTGCCACAACCGGGCATACAGCCCTTGCTGCTCCAGCAACTCACTGTGGCTGCCACTCTCG  <  NC_002947/5159839‑5159692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.