New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5160427 =	33 (1.120)	4 (0.140)	4/230	NT	10.5%	coding (676/1212 nt)	PP_4543	hypothetical protein
	?	NC_002947	5160466 =	37 (1.340)					coding (637/1212 nt)	PP_4543	hypothetical protein

ACCCGGCGCTGGACGCGCAGTTGGCGGGCCTGCCTGGGTGGATGGAACGCCTGGGCTGCCAGTTTCACTGGCAAAACCGGGGGTATCGCGACTTCCAGGACTTTCTCGACAGCCTCAGCTCGCGCAAGCGCAAGCAGATGCGCAAGGAGCGCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5160582‑5160427 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgagcTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGATGTGCGCTCCGGAAA  >  NC_002947/5160466‑5160609                                                                                                                                                                                                                                                                                                              cCCCGGCGCTGGACGCGCAGTTGGCGGGCCTGCCTGGGTGGATGGAACGCCTGGGCTGCCAGTTTCACTGGCAAAACCGGGGGTATCGCGACTTCCAGGACTTTCTCGACAGCCTCAGCTCGCGCAAGCGCAAGCAGATGCGCAAGGAGC                                                                                                                                                        <  1:368284/149‑1   CCGGCGCTGGACGCGCAGTTGGCGGGCCTGCCTGGGTGGATGGAACGCCTGGGCTGCCAGTTTCACTGGCAAAACCGGGGGGATCGCGACTTCCAGGACTTTCTCGACAGCCTCAGCTGGCGCAAGCGCAAGCAGATGCGCGAGGAGCGC                                                                                                                                                      >  1:342592/1‑150                                                                                                                 CCTCAGCTCGCGCAAGCGCAAGCAGATGCGCAAGGAGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTT                                                                          >  1:326617/1‑116                                                                                                                 CCTCAGCTCGCGCAAGCGCAAGCAGATGCGCAAGGAGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTT                                                                          <  2:326617/116‑1                                                                                                                   TCAGCTCGCGCAAGCGCAAGCAGATGCGCAAGGAGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCA                                                                                     <  1:371756/103‑1                                                                                                                   TCAGCTCGCGCAAGCGCAAGCAGATGCGCAAGGAGCGCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCA                                                                                     >  2:371756/1‑103                                                                                                                                                       GCGAGCTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGATGTGCGCTCCGGAAA  <  2:105233/150‑1                                                                                                                                                                                                                                                                                                              ACCCGGCGCTGGACGCGCAGTTGGCGGGCCTGCCTGGGTGGATGGAACGCCTGGGCTGCCAGTTTCACTGGCAAAACCGGGGGTATCGCGACTTCCAGGACTTTCTCGACAGCCTCAGCTCGCGCAAGCGCAAGCAGATGCGCAAGGAGCGCGAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5160582‑5160427 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgagcTGAGGCTGTCGAGAAAGTCCTGGAAGTCGCGATACCCCCGGTTTTGCCAGTGAAACTGGCAGCCCAGGCGTTCCATCCACCCAGGCAGGCCCGCCAACTGCGCGTCCAGCGCCGGGTCGGTGAAGTTGATGTGCGCTCCGGAAA  >  NC_002947/5160466‑5160609

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.