| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5355246 = | 36 (1.220) | 4 (0.140) | 4/240 | NT | 10.1% | coding (504/918 nt) | truB | tRNA pseudouridine(55) synthase TruB |
| ? | NC_002947 | 5355272 = | 36 (1.250) | coding (478/918 nt) | truB | tRNA pseudouridine(55) synthase TruB | |||||
TTGGAGTTGCTCGAGTGCGAAGGCACCCGTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5355278‑5355246‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaACTCCAAGCGGTTAATAGTAACAGAACGCGCCTCGCGCTCCACTACCTCTCCTGCACGTGCCAGCTTGTACAACGGCTGGCCGTCACGCTTGA > NC_002947/5355272‑5355364 TTGGAGTTGCTCGAGTGCGAAGGCACCCGTGCAACTCCAAGCGGTTAATAGTAACAGAACGCGCCTCGCGCTCCACTACCTCTCCTGCACGTGCCAGCTTGTACAACGGCTGGCCGTCACGCTTGA > 1:548362/1‑126TTGGAGTTGCTCGAGTGCGAAGGCACCCGTGCAACTCCAAGCGGTTAATAGTAACAGAACGCGCCTCGCGCTCCACTACCTCTCCTGCACGTGCCAGCTTGTACAACGGCTGGCCGTCACGCTTGA < 2:548362/126‑1 TTGCTCGAGTGCGAAGGCACCCGTGCAACTCCAAGCGGTTAATAGTAACAGAACGCGCCTCGCGCTCCACTACCTCTCCTGCACGTGCCAGCTTGTACAACGGCTGG > 1:516043/1‑107 TTGCTCGAGTGCGAAGGCACCCGTGCAACTCCAAGCGGTTAATAGTAACAGAACGCGCCTCGCGCTCCACTACCTCTCCTGCACGTGCCAGCTTGTACAACGGCTGG < 2:516043/107‑1 TTGGAGTTGCTCGAGTGCGAAGGCACCCGTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5355278‑5355246‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaACTCCAAGCGGTTAATAGTAACAGAACGCGCCTCGCGCTCCACTACCTCTCCTGCACGTGCCAGCTTGTACAACGGCTGGCCGTCACGCTTGA > NC_002947/5355272‑5355364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |